Inaccurate Discussion: A Response to Scott LaFee’s “Intelligent Discussion” ( Union Tribune , June 8, 2005) [Long Version]

by IDEA Center Staff (First Posted July 7, 2005)


Fake Cover of the Union Tribune

Pictured above is a FAKE cover of the San Diego Union Tribune, which in reality actually did publish an inaccurate article against intelligent design on June 8th, 2005. The article only interviewed scientists who were anti-ID and contained no quotes from pro-ID scientists or organizations. Many of the statements by the scientists contained inaccuracies about intelligent design, raising reasonable suspicion as to whether some of them were adequately informed about intelligent design.


The above graphic incorporates a modified version of “The Scientists” by cartoonist Lee Bullen. Used with permission.

Introduction:

One of the foundational tenets of the IDEA Philosophy is to value dialogue, discussion, and exchange with those who are critical of intelligent design. We at the IDEA Center were pleased to see that the Union Tribune covered intelligent design. However, we were saddened that they chose to only interview scientists who were anti-ID, and that the article did not seek dialogue, discussion, and exchange with scientists or organizations holding pro-ID viewpoints.



We were also saddened and concerned that many of the statements about intelligent design in the article were highly inaccurate. Thus, we have composed this response with the purpose of helping to correct much of the misinformation about intelligent design in “Intelligent Discussion” by Scott Lafee (Union Tribune, June 8, 2005). Additionally, the IDEA Center is sponsoring a series of Intelligent Design Video Nights at the Chula Vista Public Library, where the public will have an opportunity to freely view 3 intelligent design videos. This will help correct some of the misinformation in the article about intelligent design theory.



The grey boxes contain quotes from “Intelligent Discussion,”
followed by commentary and documentation correcting the various
inaccurate statements.  This response is a collective effort contributed to by various IDEA Center staff.



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Response to comments by…

  • Scott LaFee
  • Phil Unitt
  • Christopher Wills
  • Exequiel Ezcurra
  • Evan Snyder
  • Jeffrey Bada
  • Moselio Schaechter
  • Mark Tuszynski
  • Joshua Fierer
  • Ajit P. Varki
  • J. David Archibald
  • Tom Demere
  • Michael Mayer
  • Michael Simpson

  • Commentary and Response:



    Response to Comments by Scott LaFee:


    “The new challenge comes from proponents of
    "intelligent design," which argues that there are things in the world
    – namely, life – that defy scientific explanation and can only be attributed to
    the handiwork of an unidentified, supernatural creator.” (Scott LaFee, Union Tribune Staff Science Reporter)




    Response: Unfortunately this statement is not an accurate description of the actual nature of intelligent design theory and how it works.



    I.  This states that
    intelligent design argues simply that “there are things in the world – namely,
    life – that defy scientific explanation.” This is an inaccurate
    characterization for two reasons:




    Intelligent
    design theory does not simply argue that aspects of life are unevolvable and is
    not purely an argument against naturalistic processes.
     



    The theoretical way we infer design is expounded in detail
    in The Design Inference (Cambridge
    University Press, 1998) by William Dembski. An essay by William Dembksi lays
    out in detail how we can understand the products of intelligent design by
    examining how designers work:

    “To see why CSI [complex-specified information] is a reliable indicator of design, we need to examine the nature
    of intelligent causation. The principal characteristic of intelligent causation
    is directed contingency, or what we call choice. Whenever an intelligent cause
    acts, it chooses from a range of competing possibilities. This is true not just
    of humans, but of animals as well as extra-terrestrial intelligences. A rat
    navigating a maze must choose whether to go right or left at various points in
    the maze. When SETI (Search for Extra-Terrestrial Intelligence) researchers
    attempt to discover intelligence in the extra-terrestrial radio transmissions
    they are monitoring, they assume an extra-terrestrial intelligence could have
    chosen any number of possible radio transmissions, and then attempt to match
    the transmissions they observe with certain patterns as opposed to others
    (patterns that presumably are markers of intelligence). Whenever a human being
    utters meaningful speech, a choice is made from a range of possible
    sound-combinations that might have been uttered. Intelligent causation always
    entails discrimination, choosing certain things, ruling out others. Given this
    characterization of intelligent causes, the crucial question is how to
    recognize their operation. Intelligent causes act by making a choice.

    “CSI is a reliable indicator of design because its recognition coincides with
    how we recognize intelligent causation generally. In general, to recognize
    intelligent causation we must establish that one from a range of competing
    possibilities was actualized, determine which possibilities were excluded, and
    then specify the possibility that was actualized. What’s more, the competing
    possibilities that were excluded must be live possibilities, sufficiently
    numerous so that specifying the possibility that was actualized cannot be
    attributed to chance. In terms of probability, this means that the possibility
    that was specified is highly improbable. In terms of complexity, this means
    that the possibility that was specified is highly complex. All the elements in
    the general scheme for recognizing intelligent causation (i.e.,
    Actualization-Exclusion-Specification) find their counterpart in complex
    specified information-CSI. CSI pinpoints what we need to be looking for when we
    detect design.”[1]


    Thus, when one reads the actual primary literature of
    intelligent design proponents, it is quickly and easily clear that intelligent
    design theory is not simply based upon a critique of other scientific
    hypotheses, but intelligent design theory puts forth its own positive
    predictions by which we can infer intelligent design. Above, Dembski notes that
    intelligent agents can choose from one of many competing possibilities. If the
    choice made is unlikely to occur and sufficiently complex, then we can
    attribute that choice to design. This comes from our understanding of how
    intelligent agents operate–not from a negative argument against Neo-Darwinism.




    Thus, intelligent design theory is not based purely upon a
    negative critique of Neo-Darwinism.  Indeed,
    below are discussed 4 positive predictions of intelligent design theory, based
    upon our observations of how intelligent agents operate:








    Table 1. Ways Designers Act When Designing (Observations): Intelligent agents …
    (1) Take many parts and arrange them in highly specified and complex patterns which perform a specific function.


    “Experience teaches that information-rich systems … invariably result from intelligent causes, not naturalistic ones. … Finding the best explanation, however, requires invoking causes that have the power to produce the effect in question. When it comes to information, we know of only one such cause. For this reason, the biology of the information age now requires a new science of design.”[2]



    “Agents can arrange matter with distant goals in mind. In their use of language, they routinely ‘find’ highly isolated and improbable functional sequences amid vast spaces of combinatorial possibilities.”[3]



    “Indeed, in all cases where we know the causal origin of ‘high information content,’ experience has shown that intelligent design played a causal role.” [4]
    (2) Rapidly infuse any amounts of genetic information into the biosphere, including large amounts, such that at times rapid morphological or genetic changes could occur in populations.

    “Intelligent design provides a sufficient causal explanation for the origin of large amounts of information, since we have considerable experience of intelligent agents generating informational configurations of matter.”[5]

    (3) ‘Re-use parts’ over-and-over in different types of organisms (design upon a common blueprint).


    “An intelligent cause may reuse or redeploy the same module in different systems, without there necessarily being any material or physical connection between those systems. Even more simply, intelligent causes can generate identical patterns independently: We do so, for instance, every time we sign a bank check or credit card slip”[6]
    (4) Be said to typically NOT create completely functionless objects or parts (although we may sometimes think something is functionless, but not realize its true function).


    These observations can then be converted into predictions about what we should find if an object was designed:



    Table 2. Predictions of Design (Hypothesis):

    (1) High information content machine-like irreducibly complex structures will be found.

    (2) Forms will be found in the fossil record that appear suddenly and without any precursors.

    (3) Genes and functional parts will be re-used in different unrelated organisms.

    (4) The genetic code will NOT contain much discarded genetic baggage code or functionless “junk DNA”.




    These predictions can then be put to the test by observing the scientific data:
























    Table 3. Examining the Evidence (Experiment and Conclusion):

    Line of Evidence

    Data (Experiment)

    Prediction of Design Met? (Conclusion)

    (1) Biochemical complexity / Laws of the Universe.

    High information content machine-like irreducibly complex structures are commonly found. The bacterial flagellum is a prime example. Specified complexity found in the laws of the universe may be another.

    Yes.

    (2) Fossil Record

    Biological complexity (i.e. new species) tend to appear in the fossil record suddenly and without any similar precursors. The Cambrian explosion is a prime example.

    Yes.

    (3) Distribution of Molecular and Morphological Characteristics

    Similar parts found in different organisms. Many genes and functional parts not distributed in a manner predicted by ancestry, and are often found in clearly unrelated organisms. The "root" of the tree of life is a prime example.

    Yes.

    (4) DNA Biochemical and Biological Functionality

    Increased knowledge of genetics has created a strong trend towards functionality for “junk-DNA.” Examples include recently discovered functionality in some pseudogenes, microRNAs, introns, LINE and ALU elements. Examples of DNA of unknown function persist, but discovery of function may be expected (or lack of current function still explainable under a design paradigm).

    Yes.





    In this manner, intelligent design clearly makes a
    positive argument for intelligent design, as it observes how intelligent agents
    act when designing (Table 1) in order to make predictions about what we should
    find if an intelligent agent had been at work (Table 2) , and then goes out and
    tests those predictions to see if they are met (Table 3)!
      It is not simply a critique of Neo-Darwinism.




    B)    
    Intelligent
    design does not argue that characteristics of life “defy
    scientific explanation” because intelligent design itself puts
    forth a scientific explanation. 
    Intelligent design simply argues that Neo-Darwinism is the wrong
    scientific explanation for the origin of many aspects of life—it does not argue
    that there is no “scientific explanation.”
      In contrast, intelligent design theory argues
    that there IS a scientific explanation: intelligent design.




    2.     
    The
    second problem with the first statement above is that it states that
    intelligent design appeals to a “supernatural creator.”
      Again, this is an inaccurate statement about intelligent design theory.  




    Many critics of intelligent design (including your article
    on ID) have inaccurately stated that intelligent design is an argument for the
    existence of God, or that it posits an explicitly supernatural creator. The
    reasons why critics misconstrue intelligent design in this fashion are apparent and
    twofold:


  • Appealing to God or the supernatural makes intelligent design
    unscientific because the scientific method cannot detect the supernatural
  • Appealing to God or the supernatural guarantees that intelligent design
    cannot be taught in public schools since the U.S. Supreme Court declared in
    1987 that teaching a "supernatural creator" is religion, and
    unconstitutional.[7]
  • By calling intelligent design as an appeal
    to the supernatural, the public has been misled into thinking that intelligent
    design is both unscientific and unconstitutional to teach. Thankfully, the reality of intelligent design theory is much different from how it was portrayed in the article.



    In reality, intelligent design cannot tell you if the
    designer was natural, supernatural, cosmic, alien, humanoid, God-like, or
    anything.  Many intelligent design
    proponents have beliefs about the identity of the designer, but these beliefs
    do not stem from intelligent design theory.  



    For example, I personally am a Christian and I believe the
    identity of the designer is the God of the Bible. However, I do not derive this
    belief from intelligent design theory. 



    Indeed, science can only study natural objects, and cannot
    make statements about the supernatural. IF it is correct to state
    that intelligent design theory appeals to a specifically supernatural creator,
    then intelligent design would not be scientific. However, the claim that
    intelligent design theory proposes a supernatural designer, or that it
    specifically appeals to God, is a mischaracterization of intelligent design
    theory, and the article is not correct.

    The Actual Arguments of Leading ID Proponents



    An extensive look at the actual writings and arguments of
    those in the ID research community reveals that intelligent design is not an
    appeal to the supernatural, nor is it trying to "prove" the existence
    of God. The consensus of ID proponents is intelligent design theory does not
    allow one to identify the designer as natural or supernatural, because to do so
    would go beyond the limits of scientific inquiry.




    Here are some excerpts from ID literature making it clear
    that ID is not an appeal to God or the supernatural:


    “Intelligent design is modest
    in what it attributes to the designing intelligence responsible for the
    specified complexity in nature. For instance, design theorists recognize that
    the nature, moral character and purposes of this intelligence lie beyond the
    competence of science and must be left to religion and philosophy.”[8]



    “If science is based upon
    experience, then science tells us the message encoded in DNA must have
    originated from an intelligent cause. But what kind of intelligent agent
    was it? On its own, science cannot answer this question; it must leave it to religion
    and philosophy.
    But that should not prevent science from acknowledging
    evidences for an intelligent cause origin wherever they may exist. This is no
    different, really, than if we discovered life did result from natural causes. We
    still would not know, from science, if the natural cause was all that was
    involved, or if the ultimate explanation was beyond nature, and using the
    natural cause
    .”[9]



    “Surely the intelligent design
    explanation has unanswered questions of its own. But unanswered questions, which
    exist on both sides, are an essential part of healthy science; they define the
    areas of needed research. Questions often expose hidden errors that have
    impeded the progress of science. For example, the place of intelligent design
    in science has been troubling for more than a century. That is because on the
    whole, scientists from within Western culture failed to distinguish between
    intelligence, which can be recognized by uniform sensory experience, and the
    supernatural, which cannot. Today we recognize that appeals to intelligent
    design may be considered in science, as illustrated by current NASA search for
    extraterrestrial intelligence (SETI). Archaeology has pioneered the development
    of methods for distinguishing the effects of natural and intelligent causes. We
    should recognize, however, that if we go further, and conclude that the
    intelligence responsible for biological origins is outside the universe
    (supernatural) or within it, we do so without the help of science.
    “[10]




    “The idea that life had an intelligent source is hardly unique to
    Christian fundamentalism. Advocates of design have included not only Christians
    and other religious theists, but pantheists, Greek and Enlightenment
    philosophers and now include many modern scientists who describe themselves as
    religiously agnostic. Moreover, the concept of design implies absolutely
    nothing about beliefs and normally associated with Christian fundamentalism,
    such as a young earth, a global flood, or even the existence of the Christian
    God. All it implies is that life had an intelligent source.”[11]



    “The most important difference [between modern intelligent design theory
    and Paley’s arguments] is that [intelligent design] is limited to design
    itself; I strongly emphasize that it is not an argument for the existence of a
    benevolent God, as Paley’s was. I hasten to add that I myself do believe in a
    benevolent God, and I recognize that philosophy and theology may be able to
    extend the argument. But a scientific argument for design in biology does
    not reach that far.
    This while I argue for design, the question of the
    identity of the designer is left open. Possible candidates for the role of
    designer include: the God of Christianity; an angel–fallen or not; Plato’s
    demi-urge; some mystical new age force; space aliens from Alpha Centauri; time
    travelers; or some utterly unknown intelligent being. Of course, some of these
    possibilities may seem more plausible than others based on information from
    fields other than science. Nonetheless, as regards the identity of the designer,
    modern ID theory happily echoes Isaac Newton’s phrase >hypothesis non fingo.[12]



    “Although intelligent design
    fits comfortably with a belief in God, it doesn’t require it, because the
    scientific theory doesn’t tell you who the designer is. While most people –
    including myself – will think the designer is God, some people might think that
    the designer was a space alien or something odd like that.”[13]



    “One of the worries about intelligent design is that it will jettison much
    of what is accepted in science, and that an “ID-based curriculum” will look
    very different from current science curricula. Although intelligent design has
    radical implications for science, I submit that it does not have nearly as
    radical implications for science education. First off, intelligent design is
    not a form of anti-evolutionism. Intelligent design does not claim that
    living things came together suddenly in their present form through the efforts
    of a supernatural creator. Intelligent design is not and never will be a
    doctrine of creation
    .”[14]



    “The conclusion that something was designed can be made quite
    independently of knowledge of the designer. As a matter of procedure, the
    design must first be apprehended before there can be any further question about
    the designer. The inference to design can be held with all the firmness that is
    possible in this world, without knowing anything about the designer.”[15]



    “The most obvious difference is
    that scientific creationism has prior religious commitments whereas intelligent
    design does not. … Intelligent design … has no prior religious commitments
    and interprets the data of science on generally accepted scientific principles.
    In particular, intelligent design does not depend on the biblical account of
    creation.”[16]



    “Intelligent design begins with
    data that scientists observe in the laboratory and nature, identifies in them
    patterns known to signal intelligent causes and thereby ascertains whether a
    phenomenon was designed. For design theorists, the conclusion of design
    constitutes an inference from data, not a deduction from religious
    authority.”[17]



    “ID is not an interventionist
    theory. Its only commitment is that the design in the world be empirically
    detectable. All the design could therefore have emerged through a cosmic
    evolutionary process that started with the Big Bang. What’s more, the designer
    need not be a deity. It could be an extraterrestrial or a telic process
    inherent in the universe. ID has no doctrine of creation. Scott and Branch at
    best could argue that many of the ID proponents are religious believers in a
    deity, but that has no bearing on the content of the theory. As for being
    “vague” about what happened and when, that is utterly misleading. ID claims
    that many naturalistic evolutionary scenarios (like the origin of life) are
    unsupported by evidence and that we simply do not know the answer at this time
    to what happened. This is not a matter of being vague but rather of not
    pretending to knowledge that we don’t have.
    “[18]


    In each of these quotes, it seems
    clear that intelligent design proponents are stating that intelligent design
    theory tells us nothing about the nature of the designer, and cannot determine
    if the designer was natural or supernatural. If intelligent design is truly a
    scientific discipline, then this makes perfect sense, for there are limits on
    what science can tell us, and science is not capable of studying the evidence
    to tell us if the designer was supernatural or natural.

    Intelligent design theory begins and ends with observations of the natural
    world. It begins with observations of intelligent agents in the natural world,
    in order to quantify the sort of information they tend to emplace into their
    designed objects. It ends with observations as we study natural objects to
    determine if they contain that information which we know is a tell-tale sign
    that an intelligent agent played a hand in the origin of that object. True to
    the scientific method, throughout the entire process of testing for intelligent
    design, we are making observations of the observable natural world.

    Science, and thus intelligent design theory, can only
    discover what is found in the observable realm. We cannot access the
    supernatural. Thus intelligent design proponents make it clear that all their
    theory can do is tell if a natural object bears the hallmarks of having been
    designed–it cannot tell you anything about the designer, much less that it was
    a supernatural deity. If some supernatural agent took action in the natural
    world, we might be able to detect that action, but not detect whether the actor
    was supernatural or otherwise.

    Science can indeed tell us if aspects of biology were designed, but it turns
    out to be silent on the question on the nature of the designer.


    Understanding the Identity of the Designer:



    The scientific theory of intelligent design cannot identify
    the designer, but only detects the past occurrence of intelligent design in the
    natural world. Intelligent design theory cannot name the designer because it
    works off the assumption that all intelligent agents would generally create
    certain types of informational patterns when they act. While we can detect that
    type of information in the natural world to infer intelligent design, finding
    that type of information does not give us any information about the nature or
    identity of the designer. All we can infer is that the object we are studying
    was designed. Consider the following diagram:








    In this diagram, many types of intelligent agents could produce identical
    objects with high levels of complex and specified information (CSI).
    Intelligent design theory can only find the object containing high levels of
    CSI and works backwards to detect if an intelligent was at work. While it can
    detect that the object was designed, it cannot discriminate what kind of
    designer designed the object, nor determine any specific properties about the
    designer, other than that it was an intelligent agent. All intelligent design
    theory can infer is that the object was designed. Intelligent design, as a
    scientific theory cannot identify the identity of the designer.

    Not identifying the designer is not a cop-out nor does it stem from an unwillingness
    to be honest about motivations. It results solely from the pure empirical
    limitations of scientific investigation. As William Dembski notes:


    “[The] only commitment [of
    intelligent design theory] is that the design in the world be empirically
    detectable…This is not a matter of being vague but rather of not pretending to
    [have] knowledge that we don’t have.” (See footnote [18])

    The scientific method and empirical data are presently
    incapable of helping to understand the identity of the designer. Thus, the
    scientific theory of intelligent design simply cannot identity the designer
    because it is not a question which can be addressed through the methods of
    science. At this point, this question of the identity of the designer cannot be answered thruogh intelligent design theory.


    The fact that the identity of the designer is a religious question does not
    negate the purely scientific methods through which we can infer merely that an
    object was indeed designed. Indeed, when we find the type of information we
    know tends to be produced by intelligent agents, we have a valid scientific
    rationale for inferring intelligent design.



    Thus, intelligent design proponents themselves readily admit
    that they may believe the designer is God. However, this belief does not derive
    from intelligent design theory.  To call
    intelligent design an appeal to a “supernatural creator” is to inaccurately describe intellignt design theory.


    “In more than 20 states, proposals supporting intelligent
    design are being considered, most notably by the Kansas State Board of
    Education, which may decide this month whether to include intelligent design
    lessons in its new science curriculum standards and encourage school teachersy
    to more aggressively challenge the precepts of Darwinism.” (Scott LaFee, Union Tribune Staff Science Reporter)



    Response: This is another inaccurate statement because the Kansas State Board of
    Education is not considering introducing intelligent design into the
    curriculum.  All they are considering is
    whether criticism of Neo-Darwinism should be taught.
      They are not considering teaching another
    alternative explanation like intelligent design.




    Documentation on what is actually being considered by the
    Kansas State Board of Education can be found at http://www.evolutionnews.org/index.php?p=465&more=1&c=1&tb=1&pb=1 where an article by Seattle Pacific University political science professor John
    West explains the actual nature of what is being considered by the Kansas State
    Board of Education.  In contrast to what
    your article contained, the actual draft being considered by the Kansas Science
    standards contains the following statement:


    “the Science Curriculum Standards do not include the theory
    of Intelligent Design. While the testimony presented at the science hearings
    included both advocates and critics of the theory of Intelligent Design, we do
    not include it in these curriculum standards. The Board does not take a
    position on this topic.”

    For more direct documentation demonstrating why the Kansas State Board of Education (“Board”) is not currently considering mandating intelligent design in the curriculum, also visit the Board’s latest working version of the science standards here, which contains the above-quoted disclaimer that the Board is not considering mandating intelligent design in the curriculum.



    Response to Comments by Phil Unitt:


    “‘Intelligent design’ is
    science only if it’s a story that can be tested by observation and
    experimentation. Is there any observation we can make or experiment we can do
    whose results would be one way if ‘intelligent design’ is true,
    another way if it is false?”  (Phil Unitt,
    ornithologist, San Diego Natural History Museum))




    Response: Dr. Unitt is correct to state that scientific ideas can be tested by “observation and experimentation” and subject to being proven false. At this point, Dr. Unitt’s lack of familiarity with intelligent design
    theory, or the wrings of intelligent design proponents becomes eminently clear, as intelligent design proponents have devised many ways of testing their ideas.



    Intelligent design is based upon the methods of science, and not upon faith. Leading intelligent design theorist William Dembski writes: 
    “Intelligent design begins with
    data that scientists observe in the laboratory and nature, identifies in them
    patterns known to signal intelligent causes and thereby ascertains whether a
    phenomenon was designed. For design theorists, the conclusion of design
    constitutes an inference from data, not a deduction from religious authority.”[19]



    “Natural causes are too stupid
    to keep pace with intelligent causes. Intelligent design theory provides a
    rigorous scientific demonstration of this long-standing intuition. Let me
    stress, the complexity-specification criterion is not a principle that comes to
    us demanding our unexamined acceptance–it is not an article of faith. Rather
    it is the outcome of a careful and sustained argument about the precise
    interrelationships between necessity, chance and design.”[20]

    Intelligent design thus uses the scientific method to detect
    design. The following is a description of the scientific method (which
    correlates with Dr. Unitt’s description of the scientific method):







    Detecting design using the scientific method:

    i. Observation:
    The ways that intelligent agents act can be observed in the natural world and
    described. When intelligent agents act, it is observed that they produce high
    levels of "complex-specified information" (CSI). CSI is basically a
    scenario which is unlikely to happen (making it complex), and conforms to a
    pattern (making it specified). Language and machines are good examples of
    things with much CSI. From our understanding of the world, high levels of CSI are
    always the product of intelligent design.

    ii. Hypothesis:
    If an object in the natural world was designed, then we should be able to
    examine that object and find the same high levels of CSI in the natural world
    as we find in human-designed objects.

    iii. Experiment:
    We can examine biological structures to test if high CSI exists. When we look
    at natural objects in biology, we find many machine-like structures which are
    specified, because they have a particular arrangement of parts which is
    necessary for them to function, and complex because they have an unlikely
    arrangement of many interacting parts. These biological machines are
    "irreducibly complex," for any change in the nature or arrangement of
    these parts would destroy their function. Irreducibly complex structures cannot
    be built up through an alternative theory, such as Darwinian evolution, because
    Darwinian evolution requires that a biological structure be functional along
    every small-step of its evolution. "Reverse engineering" of these
    structures shows that they cease to function if changed even slightly.

    iv. Conclusion:
    Because they exhibit high levels of CSI, a quality known to be produced only by
    intelligent design, and because there is no other known mechanism to explain
    the origin of these "irreducibly complex" biological structures, we
    conclude that they were intelligently designed.


    The writings of ID proponents show that intelligent design theory uses observations
    and tests to validate its claims. Incidentally, Dr. Unitt did not mention Dembski’s
    work, CSI, irreducible complexity, or the many biological-data-based arguments
    made by intelligent design proponents about intelligent design.



    Also, regarding testability of
    intelligent design, a number of testable predictions made by intelligent design
    proponents are outlined in detail in Tables 1-3 above.
     



    “In any case, even if God – or someone claiming to be God – were to emerge in a puff of smoke on the floor of the Senate and claim to have created the universe, that story would not be science unless there were
    some independent means of testing that claim through observation and
    experimentation.” (Phil Unitt, ornithologist, San Diego Natural History Museum)



    Response: Of course Dr. Unitt’s statements
    here are completely correct. The question is, what relevance does it have to
    intelligent design theory?  Such criticisms have no application to intelligent design theory for the following reasons:



    1)    
    Intelligent
    design theory is not claiming that “God” or any other designer in particular
    created the universe



    2)    
    Intelligent
    design is not basing its claims off of any religious authority or scriptural
    test.  This is explained by William
    Dembski:


    “Intelligent design begins with data that scientists
    observe in the laboratory and nature, identifies in them patterns known to
    signal intelligent causes and thereby ascertains whether a phenomenon was
    designed. For design theorists, the conclusion of design constitutes an
    inference from data, not a deduction from religious authority.”[21]

    Thus, intelligent design is very simple. Here is a basic
    schematic of how it works:

    Intelligent design theory simply observes intelligent agents
    in nature and observes that when they act, they tend to design objects with
    property X. If we can then go out into nature and test to see if objects
    contain property X, we can construct a testable, repeatable, independent mode
    of detecting design.

    In fact, this type of reasoning is already employed with the
    Search for Extra-Terrestrial Intelligence (SETI) Project.  Popularized in the movie
    Contact based upon the novel by Carl Sagan, SETI employs arrays of
    radiotelescopes to scan the skies for electromagnetic signals with an
    extraterrestrial intelligent origin.  The
    challenge posed to SETI researchers is to discriminate between radiosignals
    actually sent by intelligent agents, and those of a purely natural origin.
      This is ID reasoning in action: SETI must
    detect designed radiosignals amongst naturally occurring interstellar signals.




    ID uses similar logic to detect design in biology.
      The theory is essentially a
    competing explanation for the origin of biological information.
      As Richard Dawkins observes, every cell “contains a digitally coded database larger, in information content, than all
    30 volumes of the Encyclopaedia Britannica put together.”[22] By observing that intelligent agents tend to produce tremendous amounts of encoded
    information, ID theorists look at the cell and find places where design is the best explanation.




    Response to Comments by Christopher Wills:



    “Intelligent design is not
    science, because it only goes partway through this process and leaves out the
    most important part. Advocates of intelligent design have observed the world,
    and have proposed the hypothesis that some vast intelligence must have created
    it because the world (or at least some portion of it) is too complicated to
    have arisen through natural processes.



    This is their hypothesis, and it
    is in principle testable. For example, one could look for messages or other
    evidence for the existence of a vast intelligence (see Carl Sagan’s novel
    "Contact" for a fictional example).



    […]



    But the intelligent designers have
    proposed no such experiments. Their hypothesis is therefore not subject to
    modification, much less eventual abandonment. As a consequence, intelligent
    design and its parent belief, creationism, are not science.”  (Christopher Wills, professor of biology,
    UCSD)




    Response: Firstly, a semantic correction. Dr. Wills refers to intelligent design proponents as “intelligent designers.” While intelligent design proponents are humans, and thus are “intelligent designers” the correct way to refer to a proponent of an intelligent design is not to call them an “intelligent designer.” In intelligent design theory, “intelligent designers” are those who do the designing of the objects being studied. To refer to scientists who are accepting of intelligent design theory, it might be clearer for him to use terminology such as “intelligent design proponents” or even acceptable terms of endearment like “IDists.”



    Dr. Wills makes an interesting
    concession here because he concedes that intelligent design is “in principle”
    falsifiable.  He writes “it is in
    principle testable.”  Thus, Wills contradicts
    Phil Unitt’s claim that intelligent design is not even in principle subject to
    testability.  In fact, Wills even
    mentions the SETI Project as an example of intelligent design reasoning
    in-action. Thus, Wills makes very important concessions which go towards
    intelligent design being possible to be a legitimate scientific
    hypothesis. 




    However, for Wills, it has not been practically put to the
    test.  Thus, for Wills, intelligent
    design is not science because it isn’t testable, it isn’t science because it
    simply hasn’t been tested.  Thus, Wills
    makes the following allegations: “the intelligent designers have proposed no
    such experiments. Their hypothesis is therefore not subject to modification,
    much less eventual abandonment.”




    Again, this demonstrates a complete lack of familiarity with
    the primary writings and literature of intelligent design proponents.
      Intelligent design has been tested.
      Indeed, in a recent article, “The origin of
    biological information and the higher taxonomic categories,"[23] by
    Stephen C. Meyer proposes that intelligent design might be detected if we found
    one can study the paleontological record to test if the phyla were designed in
    the Cambrian explosion.  Indeed, others
    have done computer calculation studies to test the degree to which irreducible
    complexity exists in protein-protein bonds, which may have a large bearing on
    whether or not these structures were designed.[24]
      This paper, by a leading design theorist
    Michael Behe, gives indirect support to the notion that protein-protein
    interactions exhibit intelligent design. 




    Clearly ID proponents have indeed tested their ideas against
    the data. This means that contrary to Dr. Wills’ allegations, intelligent
    design passes his second criteria for being science: that it has been subjected
    to actual tests! 



    “Or, in the case of evolution, one
    could search for sudden discontinuities in the history of life, in which a new
    structure or function has arisen without any previous history and no
    relationship to structures or functions in other related organisms. (Such new
    structures have not yet been found, by the way.)”  (Christopher Wills, professor of biology,
    UCSD)



    Response: Dr. Wills is correct to claim that
    evolution is testable.  However, his
    claim that there are no “sudden discontinuities in the history of life” or that
    there are no “new structure or function [that] has arisen without any previous
    history and no relationship to structures or functions in other related
    organisms” are pure bluffs.  The fossil
    record tells a tale where there are many new structures which appear in a
    “discontinuous” manner which betrays a simple evolutionary explanation.
    Consider the following statements from prominent biologists who were not
    bluffing about the nature of the fossil record:


    “No wonder paleontologists shied
    away from evolution for so long. It never seemed to happen. Assiduous
    collecting up cliff faces yields … a rate too slow to account for all the
    prodigious change that has occurred in evolutionary history. When we do see the
    introduction of evolutionary novelty, it usually shows up with a bang, and
    often with no firm evidence that the fossils did not evolve elsewhere!”[25]


    In 1997, vertebrate paleontologist Robert Carroll wrote:

    “Fossils would be expected to
    show a continuous progression of slightly different forms linking all species
    and all major groups with one another in a nearly unbroken spectrum. In fact,
    most well-preserved fossils are as readily classified in a relatively small
    number of major groups…"[26]


    In 1999, reviewing a book in Nature, Oxford zoologist Mark Pagel stated:

    “Palaeobiologists flocked to these
    scientific visions of a world in a constant state of flux and admixture. But
    instead of finding the slow, smooth and progressive changes Lyell and Darwin
    had expected, they saw in the fossil records rapid bursts of change, new
    species appearing seemingly out of nowhere and then remaining unchanged for
    millions of years-patterns hauntingly reminiscent of creation.”[27]

    Finally, in 2001, evolutionary biologist Ernst Mayr wrote:

    “Wherever we look at the living
    biota … discontinuities are overwhelmingly frequent…The discontinuities are
    even more striking in the fossil record. New species usually appear in the
    fossil record suddenly, not connected with their ancestors by a series of
    intermediates."[28]


    These quotes are not listed to imply that there are never any fossils in the fossil record which could be called transitionalish, or which might be interpreted as transitional forms. However, these are here to rebut Dr. Wills bold bluff that there are no “sudden discontinuities in the history of life.” Given that it appears Dr. Wills boldly proclaimed the presence of “sudden discontinuities in the history of life” as a test of evolution, it would seem that evolution has failed this test upon many occasions in the fossil record.



    While many evolutionary biologists have attempted to invoke
    “punctuated equilibrium” as an explanation for the abrupt and discontinuous
    appearance of biological novelty in the fossil record, consider this analysis
    of the implausibility of such an explanation by biologist Michael Denton:

    “[M]ajor discontinuities simply
    could not, unless we are to believe in miracles, have been crossed in
    geologically short periods of time through one or two transitional species
    occupying restricted geographical areas. Surely such transitions must have
    involved long lineages including many collateral lines of hundreds or probably
    thousands of transitional species.[29]


    Specifically, regarding one major event in the history of
    life, it appears that it occurs in a highly discontinuous manner lacking
    transitional forms:
    “It follows that 6-10 million year in the evolutionary
    time scale is but a blink of an eye. The Cambrian explosion denoting the almost
    simultaneous emergence of nearly all the extant phyla of the Kingdom Animalia
    within the time span of 6-10 million years can’t possibly be explained by
    mutational divergence of individual gene functions."[30]


    As one biology textbook writes:

    “Most of the animal phyla that
    are represented in the fossil record first appear, ‘fully formed’ and
    identifiable as to their phylum in the Cambrian some 550 million years
    ago…The fossil record is therefore of no help with respect to the origin and
    early diversification of the various animal phyla…"[31]

    In the words of the famous evolutionary biologist Richard
    Dawkins, the Cambrian Explosion 
    fossils are “Already in a very advanced state of evolution the very
    first time they appear.  It is though
    they were just planted there, without any evolutionary history.”[32]



    Thus, according to this evidence, there clearly are “sudden
    discontinuities in the history of life, in which a new structure or function
    has arisen without any previous history and no relationship to structures or
    functions in other related organisms.”  By his own standards, evolution seems to fail the test put forth by
    Christopher Wills with respect to the origin of the major body plans of animals
    as they appear in the Cambrian Explosion.



    Response to Comments by Exequiel Ezcurra:



    “(Intelligent design) postulates the existence of a
    hypothetical and abstract entity, lacking any physical concrete presence,
    unobservable and impossible to experiment with in order to explain biological
    structures and processes whose origin can be perfectly explained by the simple
    rules of natural selection.” (Exequiel Ezcurra, director of scientific research, San Diego Natural History Museum)


    Response: This
    is an odd characterization of intelligent design theory, because most
    intelligent design theorists do not cast the theory in terms of its predicting
    an “entity” and don’t even talk that much about the nature or identity of the
    designer.  As William Dembski writes:

    “Intelligent design is modest
    in what it attributes to the designing intelligence responsible for the
    specified complexity in nature. For instance, design theorists recognize that
    the nature, moral character and purposes of this intelligence lie beyond the
    competence of science and must be left to religion and philosophy.”[8]

    Rather than studying the designing agents, intelligent design theorists focus on studying the observable natural
    systems themselves to see if they bear the hallmarks of systems which were
    designed. Dr. Ezcurra’s characterization of intelligent design theory thus
    stands in stark contrast to the descriptions put forth by actual proponents of
    intelligent design, who write as follows:

    “The fundamental claim
    of intelligent design is straightforward and easily intelligible: namely, there
    exist natural systems that cannot be adequately explained in terms of
    undirected natural causes and that exhibit features which in any other
    circumstances we would attribute to intelligence.”[33]

    Thus, intelligent
    design is based upon positive predictions based upon the types of “features
    which in any other circumstance we would attribute to intelligence.”
      It does not postulate any “entities” but
    rather studies systems to see if those systems “exhibit clear hallmarks of
    [having been designed by] intelligence.”[34]




    Additionally, if
    there were any need for evidence of a designer, intelligent design theory
    itself provides it.  As noted,
    intelligent design theory studies how intelligent agents operate to figure out
    what kind of properties are typically found in objects they design. When those
    same types of properties are found in objects in nature, we have a rational
    argument for inferring that some intelligence designed those objects.



    “It is based on the acceptance of the existence of a
    completely unnecessary conjecture – that of a supernatural "intelligent
    designer" – and violates one of the most basic principles of scientific
    philosophy, the principle of parsimony, which states that natural effects
    should be explained through natural causes and that unnecessary hypotheses
    should be discarded when trying to understand the way the natural world works.”  (Exequiel
    Ezcurra, director of scientific research, San Diego Natural History Museum)




    Response:
    Here, Dr. Ezcurra again
    mischaracterizes intelligent design as an appeal to the “supernatural.’
      Dr. Ezcurra is correct to state that science
    cannot study the supernatural. However, if an object bears properties which
    seem to be like those which we find in objects we observe are created by
    intelligent agents, then the most parsimonious explanation is that such an
    object was designed. Thus, as Stephen C. Meyer writes:

    “Experience
    teaches that information-rich systems … invariably result from intelligent
    causes, not naturalistic ones. … Finding the best explanation, however,
    requires invoking causes that have the power to produce the effect in question.
    When it comes to information, we know of only one such cause. For this reason,
    the biology of the information age now requires a new science of design.” [35]



    “Agents
    can arrange matter with distant goals in mind. In their use of language, they
    routinely ‘find’ highly isolated and improbable functional sequences amid vast
    spaces of combinatorial possibilities.”[36]



    “Indeed,
    in all cases where we know the causal origin of ‘high information content,’
    experience has shown that intelligent design played a causal role."[37]


    If Meyer’s observations are correct, then intelligent design is the
    most parsimonious explanation for instances of “language” and code, and
    complexity, and isolated sequences with highly specified information content,
    such our genetic code.   This inference
    is strengthened when it is observed that current undirected hypotheses of
    biological origins, such as Neo-Darwinism, are incapable of explaining the
    origin of such biological complexity.



    Response to Comments by Evan Snyder:



    “If proponents of intelligent design (ID) wish their
    hypothesis to be treated as a science, then they must be prepared to generate experiments
    that will prove ID incorrect and teach their students how to disprove ID. If an
    "intelligent designer" is equated with "God," then, if they
    are true scientists, they must now spend their time trying to disprove the
    existence of God. I am not sure if the proponents of ID are prepared to go down
    that route – training a classroom of students to design experiments that rule
    out the existence of God.”  (Dr. Evan Snyder, neurologist and director of
    the Stem Cells and Regeneration Program at The Burnham Institute)



    Response: Again, Dr. Snyder makes the mistake that intelligent design proponents are
    arguing for the existence of “God.” As noted previously, intelligent design
    theory does not identify the existence of the designer.
     




    Additionally, Dr.
    Snyder implies that intelligent design theorists are afraid of falsifying their
    hypotheses because it will damage their faith. 
    Rather, there are clear-cut examples of Darwinists who see evidence for
    intelligent design but reject it for their own anti-theological reasons. Consider this statement by Richard Dawkins
    regarding the aforementioned explanation for the Cambrian explosion:

    “Both
    schools of thought agree that the only alternative explanation of the sudden
    appearance of so many complex animal types in the Cambrian era is divine
    creation, and both would reject this alternative.”[38]

    While intelligent
    design is not an argument for “divine creation,” the same reaction can be seen
    from Darwinists regarding intelligent design. Intelligent design theory
    threatens to overturn Darwinism, which is what Dawkins notes “made it possible
    to be an intellectually fulfilled atheist.”[39] While many scientists indeed are theists, this gives some scientists strong philosophical reasons for opposing intelligent design theory.   William Dembski notes that it is a fear of
    losing support for Darwinism which causes Darwinists like Dr. Snyder to
    improperly mischaracterize intelligent design as simply an appeal to God:

    “Why
    are critics of intelligent design so quick to conflate it with theology[?] … I
    submit that the preoccupation by critics of intelligent design with theology
    results not from intelligent design being inherently theological. Instead, it
    results from critics having built their own theology (or anti-theology, as the
    case may be) on a foundation of Darwinism. 
    Intelligent design challenges that foundation, so critics reflexively
    assume that intelligent design must be inherently theological or have a
    theological agenda.  Freud, if it were
    not for his own virulent Darwinism, would have instantly seen this as a
    projection.  Critics of intelligent
    design resort to a classic defense mechanism: they project onto intelligent
    design the very thing that intelligent design unmasks in their own views,
    namely, that Darwinism, especially as it has been taken up by today’s
    intellectual elite, has itself become a project in theology.”[40]

    “Yet, if they wish to add ID to
    the scientific curriculum, that is precisely what they must be prepared to do.
    Those experiments would then take their place with all the other experiments
    designed to rule out any hypothesis, in other words, to show that the null
    hypothesis (the idea that events and phenomena are dictated solely by chance)
    cannot be rejected.”  (Dr. Evan Snyder, neurologist and director of
    the Stem Cells and Regeneration Program at The Burnham Institute)




    Response: Dr. Snyder is of course correct that ID needs to be
    subjected to tested and attempts for falsification.
      ID proponents do not fear this, and as noted
    above
    , ID proponents have tested their ideas against the data.
      He is incorrect to assume they have not
    tested their claims.  Below is another
    summary of how ID matches up when tested against the data:



    Table 4.

     Testing
    Intelligent Design
    :


    Line of Evidence


    Data (Experiment)


    Prediction of Design Met? (Conclusion)

    (1) Biochemical complexity / Laws of the Universe.

    High information content machine-like irreducibly complex
    structures are commonly found. The bacterial flagellum is a prime example.
    Specified complexity found in the laws of the universe may be another.

    Yes.

    (2) Fossil Record

    Biological complexity (i.e. new species) tend to appear in
    the fossil record suddenly and without any similar precursors. The Cambrian
    explosion is a prime example.

    Yes.

    (3) Distribution of Molecular and Morphological
    Characteristics

    Similar parts found in different organisms. Many genes and
    functional parts not distributed in a manner predicted by ancestry, and are
    often found in clearly unrelated organisms. The "root" of the tree
    of life is a prime example.

    Yes.

    (4) DNA Biochemical and Biological Functionality

    Increased knowledge of genetics has created a strong trend
    towards functionality for "junk-DNA." Examples include recently
    discovered functionality in some pseudogenes, microRNAs, introns, LINE and ALU
    elements. Examples of DNA of unknown function persist, but discovery of
    function may be expected (or lack of current function still
    explainable under a design paradigm).

    Yes.



    The data did not
    have to turn out like this, but the data do seem to be confirming intelligent
    design.



    Response to Comments by Jeffrey Bada:



    “There is optimism that science will eventually provide an
    understanding of at least the basic processes [of the origin of life].
    Intelligent design claims that the processes involved are scientifically
    unknowable and thus must be explained by a supernatural or extraterrestrial
    creator.



    This is akin to the widely held 19th century theory of panspermia
    that life on Earth began from a spore or seed from outer space. Scientific
    research subsequently demonstrated that panaspermia was not a testable and
    verifiable scientific theory and the same applies to intelligent design today.” (Jeffrey Bada, marine chemist, Scripps Institution of
    Oceanography)




    Response: Dr.
    Bada should be commended for recognizing that intelligent design is not an
    argument specifically for a supernatural creator. However, Dr. Bada does indeed
    misconstrue intelligent design.  Bada
    claims that intelligent design claims that because the processes involved in
    the origin of life are “scientifically unknowable” that therefore intelligent
    design is the best explanation. In contrast, intelligent design makes no such
    argument from ignorance, and I am aware of no intelligent design proponent who
    has ever made such an argument. 



    As noted
    previously
    , intelligent design proponents observe that intelligent agents tend
    to produce specific types of coded information. When such high levels of
    encoded information are found in the cell, perhaps intelligent design is the
    best explanation.  Consider this argument
    from Stephen C. Meyer which rebuts Bada’s “argument from ignorance” claim with
    respect to the powerful argument ID makes to explain the origin of life:

    “Design theorists infer a past intelligent cause based
    upon present knowledge of cause and effect relationships. Inferences to design
    thus employ the standard uniformitarian method of reasoning used in all
    historical sciences, many of which routinely detect intelligent causes. We
    would not say, for example, that an archeologist had committed a "scribe
    of the gaps" fallacy simply because he inferred that an intelligent agent
    had produced an ancient hieroglyphic inscription. Instead, we recognize that
    the archeologist has made an inference based upon the presence of a feature
    (namely, "high information content") that invariably implicates an
    intelligent cause, not (solely) upon the absence of evidence for a suitably
    efficacious natural cause.




    Second … the "DNA to Design" argument does
    not depend upon an analogy between the features of human artifacts and living
    systems, still less upon a weak or illicit one. If, as Bill Gates has said,
    "DNA is similar to a software program" but more complex, it makes
    sense, on analogical grounds, to consider inferring that it too had an
    intelligent source.



    […]


    The design argument from the
    information in DNA does not depend upon such analogical reasoning since it does
    not depend upon claims of similarity. As noted above, the coding regions of DNA
    have the very same property of "specified complexity" or
    "information content" that computer codes and linguistic texts do.
    Though DNA does not possess all the properties of natural languages or "semantic
    information"–i.e., information that is subjectively
    "meaningful" to human agents–it does have precisely those properties
    that jointly implicate an antecedent intelligence.”[41]

    Dr. Bada’s statements
    also stand in contrast to Christopher Wills’ comments as Bada claims that
    intelligent design is untestable. Wills, however, who is familiar with the SETI
    project, recognizes that the claim that an object was designed is indeed
    testable.  Intelligent design proponents
    regularly cite SETI as a one of many examples of ID-reasoning being applied by
    scientists.



    Finally, Bada
    expresses “optimism” that the origin of life may still be explained via
    undirected naturalistic hypotheses. While intelligent design does not
    necessarily rise on the failure of such naturalistic hypotheses, it seems clear
    that many scientists are stumped when it comes to explaining the origin of
    life:

    If
    I were a creationist, I would cease attacking the theory of evolution … and
    focus instead on the origin of life. This is by far the weakest strut of the
    chassis of modern biology.”[42]



    More
    than 30 years of experimentation on the origin of life in the fields of
    chemical and molecular evolution have led to a better perception of the
    immensity of the problem of the origin of life on Earth rather than to its
    solution. At present all discussions on principal theories and experiments in
    the field either end in stalemate or in a confession of ignorance. New lines of
    thinking and experimentation must be tried."[43]

    Surely some scientists such as Dr. Bada may be holding out in faith that a purely naturalistic explanation will one day be found for the origin of life. However, the high level of irreducible complexity found in even the “simplest” life-form on earth makes intelligent design an exceedingly compelling explanation.



    Response to Comments by Moselio Schaechter:



    “How can anyone say that something is irreducibly complex,
    thus evolution impossible? How do they know? Could it not just escape our
    present state of understanding? Weren’t phenomena such as how inheritance takes
    place thought to be unfathomable not long ago?”  (Moselio Schaechter, adjunct professor of biology, SDSU))




    Response: Here Dr. Schaechtler
    commits the “Darwin-of-the-gaps” fallacy by assuming that all current failures
    of evolution will one day be solved.  In
    reality, it is very easy for one to question the evolvability of a structure
    based upon irreducible complexity. In fact, the very first person to pose such
    a challenge to Darwin’s
    theory was Darwin himself! 
    Darwin wrote:

    “If
    it could be demonstrated that any complex organ existed which could not
    possibly have been formed by numerous, successive, slight modifications, my
    theory would absolutely break down.”[44]

    Michael
    Behe explains that Darwin’s
    test applies to biological features discovered in modern biology in that they
    require many parts in order to function, and if one part is removed, the
    feature stops functioning.  This makes us
    severely question if these structures are evolvable.
      The burden is upon Darwinist to come up with
    an account which demonstrates that a feature can arise by “numerous,
    successive, slight modifications” for they are the ones making that claim. As
    Michael Behe writes:


    “In Darwin’s
    Black Box (page 176) I implied that many small details would be necessary
    for a real Darwinian explanation) … that’s simply what’s necessary to actually
    explain the appearance of a complex, functional system in a Darwinian fashion,
    to show that it could indeed happen as Darwinists claim. Proteins change single
    mutation by single mutation, amino acid by amino acid, so that’s the level of
    explanation that is needed. What part of “numerous, successive, slight” is so
    hard to understand?”[45]

    To answer Dr. Schaetler’s question, it is very simple
    to test for irreducible complexity.  All
    one must do is look at a system and then perform reverse engineering, through
    knockout experiments, computer simulations, or theoretical calculations to
    imagine if it, or its subsystems, could perform some kind of a function as they
    are built up, in a small step-by-step manner, over numerous small successive
    slight changes of an evolutionary pathway. 
    If it can be done, then the feature is not irreducibly complex.



    “These days, we are whittling away quite blissfully at the
    complexity of biology. For example, we have learned that "horizontal"
    transmission of whole packets of genes between species happened before and
    happens now. This means that evolution doesn’t depend just on the accumulation
    of single mutations but that organisms can change wholesale. An example is the
    plague bacillus, which appears to have arisen by such a mechanism some
    100,000 years ago. (Moselio Schaechter, adjunct professor of
    biology, SDSU)



    Response:
    Biologists surely are learning more about the complexity of biology!
      But as they learn more, they are not coming
    up with explanations for the origin of many forms of irreducibly complex biological features such as the flagellum.
      Dr. Schaechter talks about a plague which
    supposedly arose by evolution about 100,000 years ago.
      While there is no doubt that Dr. Schaechter
    has evidence that such a plague arose long ago, he provides no evidence for how
    the genes which were horizontally transmitted arose in the first place.
      Dr. Schaechter’s evidence probably comes
    simply from comparing proteins in one bacteria to proteins of another.
      This may imply common descent, but it does
    not imply that a Neo-Darwinian mechanism was at work. What is necessary is a
    detailed account of what genes were transmitted such that structures remain
    functional along each step of the evolution. 



    The genes which
    form the bacterial flagellum are highly tailored to create a complex biological
    machine. Over 40 parts are required to create an outboard rotary engine on a
    bacterium.  Michael Behe argues that such
    a structure is irreducibly complex.  What
    are the odds that such genes suddenly appeared in one bacterium to assemble
    such a complex machine?  The odds are so
    low that it should not happen in the history of the universe, and biologists
    have still not come up with an evolutionary explanation for the origin of such biological
    complexity. 



    Response to Comments by Mark Tuszynski:


    “A very simple experiment performed decades ago showed
    that when a mixture of simple chemicals was placed in a closed chamber and
    energy was added, the building blocks of life (amino acids) spontaneously
    formed. The conditions of this experiment mimicked the state of the primordial
    planet billions of years ago.



    Thus, the building blocks of life can easily be made
    through natural processes, and have been available for hundreds of millions to
    billions of years. It is not hard to conceive that, over this extended time,
    chance events and selective environmental pressure would create the remarkable
    and beautifully diverse forms of life we have today.”  (Dr. Mark Tuszynski,
    neurologist/neuroscientist, UCSD)




    Response: Dr. Tuszynski is correct that in 1953, Stanley Miller showed that most of the amino acids present in life could be created through a simple experiment. However, he is incorrect to state that “[t]he conditions of this experiment mimicked the
    state of the primordial planet billions of years ago.”
      In contrast, this experiment has fallen under
    severe criticism because of the very fact that it did not mimic the actual
    conditions on the early earth. Unfortunately, it appears that Dr. Tuszynyski is
    unaware of the current state of origin of life research. 



    Origin-of-life researchers often assume there was a purely
    natural cause, though often there is no external scientific evidence for that
    cause, only philosophical assumptions. This fact is well-illustrated by
    admissions made by famous origin of life (OOL) researcher Stanley Miller about
    why he used certain gasses in experiments producing the building blocks of
    life:

    “It is assumed that amino acids
    more complex than glycene were required for the origin of life, then these
    results indicate a need for CH4 (methane) in the atmosphere"[46]



    &



    “We believe that there must have been a period when the earth’s
    atmosphere was reducing, because the synthesis of compounds of biological
    interest takes place only under reducing conditions." [47]

    Miller chose to use methane (CH4) and ammonia (NH3), not because they were actually thought to be a part of the early atmosphere but rather
    because they are essential to the production of the proper amino acids and gave
    the desired results. As noted, Stanley Miller admits that he assumed that the
    atmosphere had methane and ammonia—he did not test that hypothesis. They just
    wanted to see if they could produce the right molecules using various contrived
    mixtures of gasses. Given the simple molecules they were trying to synthesize,
    these experiments are little more than simple exercises in organic chemistry
    and literally say nothing about the chemical origin of life. Though at the
    time, Miller’s experiment was promoted as supporting the hypothesis that life
    arose out of a primordial soup, subsequent research has enumerated problems
    with the hypothesis:

    1. Miller’s
      experiment requires a reducing methane and ammonia atmosphere[48]
       however geochemical evidence says the
      atmosphere was hydrogen, water, and carbon dioxide (non-reducing) and did not have methane or ammonia.[49] The
      only amino acid produced in a such an atmosphere is glycine (and only when the
      hydrogen content is unreasonably high), and could not form the necessary
      building blocks of life.[50]
        Furthermore, numerous authors have
      demonstrated the impossibility of forming amino acids in the presence of an
      oxygenic atmosphere.[51]
    2. These
      "pre-biotic chemicals" are formed only in very small amounts and
      degrade quickly into a tar-like substance.[52]
      Not only would UV radiation destroy any molecules that were made, but their own
      short lifespans would also greatly limit their numbers. For example, at 100ºC
      (boiling point of water), the half lives of the nucleic acids Adenine and
      Guanine are 1 year, uracil is 12 years, and cytozine is 19 days .[53]
      Such short-lived molecules could never be stockpiled, even if they could be
      produced naturally at such a low temperature. Either way the rate of degradation
      is too high to accumulate enough pre-biotic organics to form a soup. But models
      for earth’s formation indicate the earth was hot, meaning degradation would
      occur even faster! If it the earth had been cold, this would work against the
      OOL by slowing the chemical reactions that supposedly allowed life to form,
      increasing the time needed for the OOL.

    3. Catch-22
      situation: We all have know ozone in the upper atmosphere protects life from
      harmful UV radiation. However, ozone is composed of oxygen which is the very
      gas that Stanley
      Miller-type experiments avoided, for it prevents the synthesis of organic
      molecules like the ones obtained from the experiments! Pre-biotic synthesis is
      in a "damned if you do, damned if you don’t" scenario. The chemistry
      does not work if there is oxygen because the atmosphere would be non-reducing,
      but if there is no UV-light-blocking oxygen (i.e. ozone – O3) in the
      atmosphere, the amino acids would be quickly destroyed by extremely high
      amounts of UV light (which would have been 100 times stronger than today on the
      early earth).[54]
      This radiation could destroy methane within a few tens of years[55] and
      atmospheric ammonia within 30,000 years.[56]

    4. At
      best the processes would likely create a dilute "thin soup,”[57] destroyed
      by meteorite impacts every 10 million years.[58]
        This severely limits the time available to
      create pre-biotic chemicals and allow for the OOL.



    Is there any geochemical evidence that the soup
    ever existed?




    There
    is no geological evidence left in the rocks that a primordial soup ever
    existed. If there was ever a soup, the earliest Precambrian rocks should
    contain high levels of non-biological carbon, for biologically produced carbon
    contains an excess of "isotopically light" carbon. Ancient
    sedimentary rocks, however, do not reveal this signature,[59] and
    thus there is no positive evidence for this soup. If these processes produced a
    soup, they should have left a significant (1-10 meter thick) layer of tar
    encircling the earth, but there is no geochemical evidence of such a layer[60]
    nor any published geochemical evidence of a primordial soup.[61]
      Had there been a soup, then the rocks thought
    to be from that time period ought to contain an "unusually large
    proportion of carbon or organic chemicals" which they do not.[62]

    So drastic is the evidence against pre-biotic synthesis, that in 1990 the Space
    Studies Board of the National Research Council recommended to scientists a
    "reexamination of biological monomer synthesis under primitive Earthlike
    environments, as revealed in current models of the early Earth."[63]




    Response to Comments by Joshua Fierer:


    “If malaria in a tropical environment was the selective
    force that led to the prevalence of sickle cell anemia and thalessemia, are we
    to conclude that the intelligent designer used malaria for that purpose or that
    the designer overlooked malaria as a problem and there had to be a post-hoc fix
    to change the structure of red blood cells?” (Dr. Joshua Fierer, professor of medicine and pathology, UCSD)




    Response: Dr. Fierer here does not realize that intelligent design theory is not a moral
    argument about the “goodness” or “badness” of a design.
      After all, many objects of destruction, such
    as torture chambers, guns, and nuclear weapons are designed.




    There is no
    incompatibility between having the efficient cause of intelligent design
    combined with a final cause which is “evil.” Something can be morally evil
    and yet be intelligently designed. For example, medieval torture chambers
    contain clearly designed tools that were designed to inflict harm, and even
    death. The same can be said of land mines-they are designed to kill or maim people. Yet, in both cases, the fact that these may be considered evil
    designs does not detract from the simple claim that they were indeed designed by an intelligent agent.
    Intelligent design does not say anything about benevolent design.
    Many features may be initially
    designed for good purposes, but then later become twisted and used for evil. See Pseudogenes or Psuedoscience for a full discussion of this issue.




    Also, intelligent
    design does not purport to be an explanation for every aspect of biology, but
    rather is an explanation for the origin of irreducible complexity in biology when it is
    appropriate to invoke as the best explanation. For example, Dr. Fierer mentions that genetic variation in hemoglobin in human populations can be attributed to microevolution. Dr. Fierer is probably right. But ID doesn’t try to account for trivial microevolutionary variation within a species type changes. Rather, ID focuses on the origin of novel functions, forms, genes, and biochemical pathways in the first place. The genetic variation in human hemoglobin molecules represents a trivial
    change in biological complexity as it represents just a few amino acid substitutions within the same gene.  It is
    surely something which could be easily accounted for via natural selection. If
    intelligent design is not the best explanation for such changes, so be it.
      But when we are dealing with the origin of
    biological novelty, such as entirely new structures (like the bacterial
    flagellum) or genes (such as the entire globin family of genes), perhaps
    intelligent design is a better explanation.
     Perhaps Neo-Darwinism is the best explanation for
    the origin of genetic variation among hemoglobin genes within the human population.
      This does not challenge intelligent design
    theory.



    This may thus reflect a misunderstanding about intelligent design theory on the part of Dr. Fierer. Dr. Fierer seems to assume that if intelligent design is invoked, that it therefore must be invoked to explain everything, including the origin of genetic variation among humans with regard to the sequence of hemoglobin protines. However, a cursory look at ID literature indicates that ID proponents have rigorous tests where they do not always infer intelligent design, particularly when law/chance based processes, such as the Darwinian selection-mutation mechanism, are the best explanations.



    Response to Comments by Ajit P. Varki:


    “Years ago, it was claimed that the Earth was the center of
    the universe. It was also claimed that the Earth was flat. Many scientists were
    persecuted and even killed because they presented evidence against these
    faith-based positions.



    Debating intelligent design would be like debating someone
    who still insists that the Earth is flat, or that it is at the center of the
    universe, simply because he has not gone up in space in person and viewed the
    Earth and the solar system in person.



    Since such positions would be based strictly on faith,
    there is little point in discussing them, let alone giving them undeserved
    legitimacy. (Dr. Ajit P. Varki, professor of medicine, UCSD)




    Response: It is a terrible
    thing that people were persecuted for their beliefs in the past.
      Unfortunately, this persecution continues
    today.  People today are rarely killed because of their beliefs (though it does happen in some countries), but a form of intellectual persecution still takes place. Some scientists close their minds and ridicule intelligent
    design proponents, and evolution is shielded
    from criticism in schools by people who want to censor scientific evidence from
    students.  Those who question evolution
    are ridicule called promoters of “lunacy” or “intellectual drivel.” (See Professor
    Archibald’s comments below
    .)  This
    illiberal and anti-intellectual approach to dealing with important scientific
    issues promotes the same spirit which drove the Inquisition. Only today, the
    situation is in the reverse, for it is the materialists who are being the
    dogmatists and seeking to oust those with anti-materialistic ideas from the
    public voice. 



    Regarding faith, evolution does have evidence supporting it, but much of
    it is also faith based.  Richard Lewontin
    wrote that opposition to intelligent design comes not from evidence, but from a
    faith based commitment to materialist mindset:

    “We take the side of science in spite of the patent absurdity of some of
    its constructs, in spite of its failure to fulfill many of its extravagant
    promises of health and life, and in spite of the tolerance of the scientific
    community for unsubstantiated just-so-stories, because we have a prior commitment,
    a commitment to materialism. It is not that the methods and institutions of
    science somehow compel us to accept a material explanation of the phenomenal
    world, but, on the contrary, that we are forced by our priori adherence to
    material causes to create an apparatus of investigation and a set of concepts
    that produce material explanations, no matter how counterintuitive, no matter
    how mystifying to the uninitiated. Moreover, that materialism is an absolute,
    for we cannot allow a Divine Foot in the door."[64]

    Or consider this statement by Darwinist philosopher Michael Ruse talking about how evolution is based upon metaphysical assumptions:


    “And it seems to me very clear that at some very basic level, evolution as a scientific theory makes a commitment to a kind of naturalism, namely, that at some level one is going to exclude miracles and these sorts of things, come what may.” (http://www.leaderu.com/orgs/arn/orpages/or151/mr93tran.htm)

    Thus, today, much of evolutionary science is based upon a faith, or philosophical assumption, that there has been no intervention by an intelligence (what Ruse calls “miracles”) throughout the history of life.



    Intelligent design theory seeks to liberate science from its faith-based
    commitment to methodological naturalism and help science take off its
    philosophical blinders and consider the empirical, testable claim that life was
    designed.  As discussed previously,
    intelligent design is not based upon faith but rather uses the scientific method to make its claims. Dr. Varki does not appear to be familiar with the writings of intelligent design proponents because he assumes that ID proponents make arguments based upon faith or religious authority. Indeed, in his 1998 Cambridge University Press book The Design Inference, William Dembski lays out the theoretical grounds for inferring design and makes no reliance upon faith and uses strictly empirical arguments.
      In his 1998 peer reviewed book, “The Design
    Inference,” (Cambridge University Press) William Dembski
      lays out the theory by which we detect
    design. This book makes no reliance upon religious texts, and is a strictly empirical
    argument for detecting design. It is not a religious argument.
      Thus, intelligent design is not based
    “strictly on faith” but rather makes no reliance upon faith in making its
    arguments.  Thus, it is wrong to compare
    intelligent design to anything which is based “striclty on faith.”



    Dr. Varki here compares belief in intelligent design to belief that the
    earth is the center of the universe. Incidentally, many of the scientists who helped lay the
    foundations of modern cosmology and physics, such as Kepler and Newton, both
    were proponents of intelligent design. Kepler, who discovered that planets orbit the sun in elliptical orbits, wrote that “We see how God, like a human architect, approached the founding of the world according to order and rule and measured everything in such a manner.” (Johannes Kepler, quoted in: J. H. Tiner, Johannes Kepler-Giant of Faith and Science, Mott Media, Milford, Michigan (USA), 1977, pg. 178.)
    If one were to be consistent with faulty reasoning such as this, then the scientific method,
    physics, and the theory of electro-magnetism must also be religious – Sir
    Francis Bacon, Rene Descartes, Isaac Newton, James Clerk Maxwell, and Michael
    Faraday are just a few Christian forefathers of modern science whom were often
    motivated by their belief in God in their scientific conceptions.


    Dr. Varki may
    choose not to have any discussion or dialogue with intelligent design proponents.
       But taking the “ostrich approach” (i.e.
    stick your head in the sand and hope it goes away) to intelligent design only
    helps fair-minded people see that such scientists have closed minds and metaphysical
    blinders on that are keeping them from objectively dealing with the debate over
    intelligent design. Although we are saddened when evolutionists take this
    approach, I must admit that the IDEA
    Center benefits greatly
    when evolutionists pretend that we aren’t worth talking to, because fair-minded
    students can see right through this bluff, and it has the effect of
    exponentially increasing student interest and curiosity in intelligent
    design.  That’s why IDEA Clubs are
    appearing on so many prominent university campuses around the
    United States.
      We hope that evolutionists will be interested
    in dialogue, but for those who aren’t, the world is clearly moving on without
    them, and student interest continues to grow.



    Incidentally, Dr. Varki’s proclamation of boycotting mere dialogue with intelligent design proponents exposes the harsh and philosophically biased political climate found in some scientific circles against intelligent design. In such circles, it is impossible for intelligent design theorists, even when they are credentialed and making credible arguments, to gain a fair hearing before other scientists who have the mentality of Dr. Varki. No wonder ID proponents are rejected when they submit their work to scientific journals–there is an incredibly harsh bias against them in some circles of scientific community!



    Thankfully, some evolutionary biologists are recogizing that the ostrich strategy is working against them. Both a recent article by evolutionary biologist Allen Orr in The New Yorker, and a recent article in Nature recommended that biologists not take the ostrich approach and begin addressing intelligent design. As Orr wrote, ignoring ID stems from a desire to not legitimize intelligent design as a science. But both articles recommend that scientists not ignore intelligent design. Thus, Dr. Varki’s attitude towards intelligent design is at odds with what was published on the cover of Nature on April 28, 2005, and also at odds with the attitude of evolutionary biologists such as Allen Orr.



    Finally, Dr.
    Varki employs the refuted “religious people once advocated the false belief
    that the earth was flat in contravention to science” myth.
      In fact, educated religious people never
    promoted the notion that the earth was flat. 
    As documented by UC Santa Barbara history professor Jeffrey Burton
    Russell “with extraordinary few
    exceptions no educated person in the history of Western Civilization from the
    third century B.C. onward believed that the earth was flat.” [65]  Historian Russell concludes his article as
    follows:

    “The
    reason for promoting both the specific lie about the sphericity of the earth
    and the general lie that religion and science are in natural and eternal
    conflict in Western society, is to defend Darwinism. The answer is really only
    slightly more complicated than that bald statement. The flat-earth lie was
    ammunition against the creationists. The argument was simple and powerful, if
    not elegant: ‘Look how stupid these Christians are. They are always getting in
    the way of science and progress. These people who deny evolution today are
    exactly the same sort of people as those idiots who for at least a thousand
    years denied that the earth was round. How stupid can you get?’



    But that is not the truth.” [66]


    Response to Comments by J. David Archibald:



    “One should never debate such lunacy. It implies that
    there is something to debate. It only gives it legitimacy it does not deserve.
    The cry that teaching intelligent design in the science classroom should be
    permitted because of intellectual freedom is a red herring. We don’t teach
    alchemy, astrology and witchcraft in the science classroom, because like
    intelligent design, they are not science. By the same token, all Americans, not
    just scientists, should speak out and complain when their schools are forced to
    allow such intellectual drivel into their schools.” (J. David Archibald, professor of biology, SDSU)




    Response: Sadly,
    Dr. Archibald’s response contains much emotionally-based rhetoric and harsh
    language, and thus it is difficult to discern the substance behind his
    comments.  Additionally, Dr. Archibald’s response exposes the intense psychological and political opposition faced by intelligent design theorists among scientists who will not even speak to intelligent design proponents about the issue.



    A couple claims can be gleaned from Dr. Archibald’s response and responded to. Dr. Archibald compares ID to witchcraft, astrology, and alchemy. It is inappropriate
    and fallacious to compare intelligent design to alchemy, astrology, or
    witchcraft.  There is no empirical
    support for alchemy, witchcraft, or astrology, while there is empirical support for intelligent design. Government-funded scientists, such as the famous Carl Sagan, have already attempted to detect design in radiosignals from outerspace in the SETI project, and thus scientists are already employing the very reasoning Dr. Archibald calls “lunacy” and “drivel.” Additionally, design has been taken seriously a legitimate conclusion in physics for many years. Consider these quotes from physicists:


    “This fine-tuning has two possible explanations. Either the Universe
    was designed specifically for us by a creator or there is a multitude
    of universes- a `multiverse’.”
    (Chown, Marcus [Science Editor, New Scientist], “Anything Goes,” New
    Scientist, 6 June 1998, Vol. 158, No. 2137, p.28)


    “Taken together they [lists of design evidences] provide impressive
    evidence that life as we know it depends very sensitively on the form
    of the laws of physics, and on some seemingly fortuitous accidents in
    the actual values that nature has chosen for various particle masses,
    force strengths, and so on. If we could play God, and select values
    for these natural quantities at whim by twiddling a set of knobs, we
    would find that almost all knob settings would render the universe
    uninhabitable. Some knobs would have to be fine-tuned to enormous
    precision if life is to flourish in the universe”
    (Paul Davies, “The Unreasonable Effectiveness of Science”, in John
    Marks Templeton, Evidence of Purpose (New York: The Continuum
    Publishing Company, 1996), p. 46.)


    “The more I study science, the more I believe in God.”
    (Albert Einstein)



    “The temptation to believe that the Universe is the product of some
    sort of design, a manifestation of subtle aesthetic and mathematical
    judgment, is overwhelming. The belief that there is “something behind
    it all” is one that I personally share with, I suspect, a majority of
    physicists.”
    (Davies, Paul C.W. [Physicist and Professor of Natural Philosophy,
    University of Adelaide], “The Christian perspective of a scientist,”
    Review of “The way the world is,” by John Polkinghorne, New Scientist,
    Vol. 98, No. 1354, pp.638-639, 2 June 1983, p.638)



    “If I were a religious man, I would say that everything we have
    learned about life in the past twenty years shows that we are unique,
    and therefore, special in God’s sight.”
    (University of Virginia astronomers R.T. Rood and J.S. Trefil in their
    book Are We Alone)



    “Let us recognize these speculations for what they are. They are not
    physics but, in the strictest sense, metaphysics. There is no purely
    scientific reason to believe in an ensemble of universes. By
    construction these other worlds are unknowable by us. A possible
    explanation of equal intellectual respectability – and to my mind
    greater economy and elegance would be that this one world is the way
    it is because it is the creation of the will of a Creator who purposes
    that it should be so.”
    (Polkinghorne, John C.* [former Professor of Mathematical Physics,
    Cambridge University, and Anglican priest], “One World: The
    Interaction of Science and Theology,” [1986], SPCK: London, 1987, p.80)



    “The details differ, but the essential elements in the astronomical
    and biblical accounts of Genesis are the same: the chain of events
    leading to man commenced suddenly and sharply at a definite moment in
    time, in a flash of light and energy … For the scientist who has
    lived by his faith in the power of reason, the story ends like a bad
    dream. He has scaled the mountain of ignorance; he is about to conquer
    the highest peak; as he pulls himself over the final rock, he is
    greeted by a band of theologians who have been sitting there for
    centuries.”
    (Robert Jastrow (1978), God and the Astronomers)



    “Contemporary religious thinkers often approach the Argument from
    Design with a grim determination that their churches shall not again
    be made to look foolish. Recalling what happened when churchmen
    opposed first Galileo and then Darwin, they insist that religion must
    be based not on science but on faith. Philosophy, they announce, has
    demonstrated that Design Arguments lack all force. I hope to have
    shown that philosophy has demonstrated no such thing. Our universe,
    which these religious thinkers believe to be created by God, does
    look, greatly though this may dismay them, very much as if created by
    God.”
    (John Leslie, Universes (London: Rougledge, 1989), pg. 40, 64-65, 22)


    “It is hard to resist the impression of something – some influence
    capable of transcending spacetime and the confinements of relativistic
    causality – possessing an overview of the entire cosmos at the instant
    of its creation, and manipulating all the causally disconnected parts
    to go bang with almost exactly the same vigour at the same time, and
    yet not so exactly Coordinated as to preclude the small scale, slight
    irregularities that eventually formed the galaxies, and us.”
    (Paul Davies, the Accidental Universe (Cambridge: Cambridge University
    Press, 1982), pp. 73)

    Dr. Archibald gives no reasons
    for why intelligent design belongs in the same class as “alchemy, witchcraft,
    or astrology” and thus his arguments seem to be mere assertions.
      Assertions are worthless unless there are
    reasons to back them up. His argument
    insinuates that intelligent design has no empirical value. In contrast,
    intelligent design provides a casually adequate explanation for the origin of
    biological complexity. Proponents of
    alchemy, astrology, and witchcraft do not advocate their ideas to the
    scientific community, and do not have data supporting their claims. C
    ontrary to Mr. Archibald’s assertions, intelligent design proponents
    are making their case to the scientific community.
      A recent volume,
    Debating Design, published by Cambridge University Press, contains
    a balance of essays from scholars on both sides of this scientific debate.[67]
      Since 2004, three papers by ID
    theorists have appeared in mainstream scientific journals finding data to
    support ID arguments.[68]
    Many leading intelligent design proponents are scientists who have Ph.D.’s from legitimate institutions and are often professors at reputable universities.



    Two claims implicated in these papers may be of interest to those wondering if
    Archibald is accurate to assert that intelligent design is “lunacy”:



    1. Microbiology: Darwin himself proposed a test
    where “[i]f it could be demonstrated that any complex organ existed which could
    not possibly have been formed by numerous, successive, slight modifications”
    then his theory would “absolutely break down.”[69]  Darwin
    believed he could find “no such case”[70]
    but the biotechnological revolution has revealed a universe of micro-machines
    unimagined by Darwin.  One such machine is the bacterial flagellum,
    an outboard rotary motor for propelling bacteria.  In Darwin’s
    Black Box, Behe explains the flagellum requires a minimum core of parts to
    function.[71]
    It is “irreducibly complex” because if it was less complex, its function would
    cease.  Irreducible complexity meets
    Darwin’s test because
    natural selection cannot preserve features which would have no function over
    the “numerous, successive, slight modifications” of their evolution.


    2. The Fossil Record:
    About 530 million years ago, in what
    paleontologists call the “Cambrian explosion,” nearly every major living animal
    phylum appears in a geological instant. 
    Prior to this mass-origin of diversity, there are no direct plausible
    evolutionary ancestors.  In Dawkins’s
    words, these fossils appear “just planted there, without any evolutionary
    history.”[72]
    ID proponents see this ancestor-less appearance of mass-biological diversity as
    powerful evidence against Neo-Darwinism. This “explosion” is precisely what we
    would expect had an intelligent agent rapidly infused large amounts of
    information into the biosphere. As it turns out, these “explosions” are common in the history of life, and may represent many “design events” in the history of life.



    The burden is upon Dr. Archibald to establish that
    intelligent design is not the best explanation in these cases if he is to claim
    that intelligent design is “lunacy” or “drivel.”



    There are principled reasons why intelligent design is
    nothing like alchemy, witchcraft, or astrology: it all has to do with the data.
    There is much data supporting intelligent design, and non supporting alchemy,
    witchcraft, or astrology.  The evidence
    for design is not coming from faith or superstition, but from reasonable
    interpretations of data.  ID theorists
    have a case which cannot just be dismissed as “lunacy.” Dr. Archibald appears
    uninterested in taking intelligent design seriously.



    However, it is likely that Dr. Archibald’s dogmatic opposition to design is stemming from the same philosophical reasons which caused physicist Arthur Eddington to bitterly oppose design in physics (despite the evidence):


    “Philosophically, the notion of a beginning of the present order of
    Nature is repugnant . . . I should like to find a genuine loophole.”
    (Sir Arthur Eddington)

    Dr. Archibald’s “loophole” is to stick his head in the sand and call names. While this tactic is most unfortunate, thankfully, it never has his desired effect. Organizations like ours which attempt to promote intelligent design to students actually benefit greatly when faculty take dogmatic, anti-intellectual, and illiberal anti-ID positions. This is because students tend to have open minds and are willing to learn about and dialogue over ideas, even when they disagree with them. Students are thus turned off by dogmatism, and when they see their professors taking illiberal approaches to important issues, they immediately see through the dogmatism and become intensely interested in the subject of intelligent design (even if they ultimatley disagree with it). Thus, while we are saddened when evolutionists become dogmatic and use emotional rhetoric against intelligent design to stifle dialogue over this issue, we cannot help but recognize that their unfortunate tactic serves to further our goals of increasing student interest and awareness over intelligent design.



    Dr. Archibald also implies that students should not learn
    about intelligent design.   Should
    students learn about such alternative scientific ideas?



    Yes. That’s what the National Science Standards say. The National Science Education Standards recommend that students engage in
    “identification of assumptions, use of critical and logical
      thinking, and consideration of alternative
    explanations.”[73]



    Yes.  That’s what the US
    Senate Said:


    “It is the sense of the Senate that:  (1) good science education
      should prepare students to distinguish the data
    or testable theories  of science from
    philosophical or religious claims that are made in the
      name of science;  (2) where biological
    evolution is taught, the  curriculum
    should help students to understand why this subject
      generates so much continuing controversy, and
    should prepare the  students to be
    informed participants in public discussions regarding
      the subject."[74]

    Yes.  That’s what Charles Darwin said:


    “A fair result can be obtained only by fully stating and balancing the facts
    and arguments on both sides of each question.”[75]

    Response to Comments by Tom Demere:



    “I have to admit that it is not that clear to me just what
    constitutes ID. Since I could find no research papers published in
    peer-reviewed scientific publications on the subject, I have had to rely on
    Internet sources. Most ID Web sites mention something about complexity, design
    and purpose and, using some form of legalese argumentation, conclude that
    because the natural world is so complex, it must have been created by an
    intelligent designer.” (Tom Demere, paleontologist, San Diego Natural History Museum)




    Response: Dr. Demere should be commended for admitting that he isn’t familiar with
    intelligent design theory, as he is the only scientist quoted in this article
    who was willing to be honest and open about his limited experience with intelligent design. Dr. Demere admits that he has only
    relied upon internet sources and has not taken the time to read any of the
    actual primary publications of ID proponents. 
    He should be commended for acknowledging that he has not read some of
    the primary and major works of ID proponents such as
    Darwin’s Black Box, The
    Design Inference
    , or Debating Design.
      He makes various complaints against the
    arguments allegedly used on various intelligent design websites. However,
    absent any references or quotations, his arguments are mere assertions and it
    is impossible to respond to them directly. 
    Clearly, however, intelligent design theory does not just say “that
    because the natural world is so complex, it must have been created by an
    intelligent designer.”  This sounds more
    like a caricature of intelligent design, and Dr. Demere is
    challenged to provide an actual reference to bolster that claim.



    Had Dr. Demere
    wanted to be sure he understood intelligent design theory before commenting on
    it publicly, there are many peer-reviewed publications on the subject by its
    proponents or sympathizers.  As noted at http://www.discovery.org/scripts/viewDB/index.php?command=view&id=2640&program=CSC%20-%20Scientific%20Research%20and%20Scholarship%20-%20Science,
    the following are scholarly peer-reviewed science-publications have supported
    intelligent design theory or intelligent design ideas:



  • Jonathan Wells,
    “Do Centrioles Generate a Polar Ejection Force? Rivista di Biologia/Biology
    Forum
    98 (2005): 37-62.

  • S.C. Meyer, “The
    Origin of Biological Information and the Higher Taxonomic Categories,” Proceedings
    of the Biological Society of Washington
    ,
    117(2) (2004): 213-239.

  • M.J. Behe and
    D.W. Snoke, “Simulating Evolution by Gene Duplication of Protein Features That
    Require Multiple Amino Acid Residues,” Protein Science, 13 (2004):
    2651-2664.


  • W.-E. Lönnig &
    H. Saedler, “Chromosome Rearrangements and Transposable Elements,” Annual
    Review of Genetics
    , 36 (2002): 389-410.

  • D.K.Y. Chiu
    & T.H. Lui, “Integrated Use of Multiple Interdependent Patterns for
    Biomolecular Sequence Analysis,” International Journal of Fuzzy Systems,
    4(3) (September 2002): 766-775.

  • M.J. Denton
    & J.C. Marshall, “The Laws of Form Revisited,” Nature, 410 (22 March
    2001): 417.I.

  • M.J. Denton,
    J.C. Marshall & M. Legge, (2002) “The Protein Folds as Platonic Forms: New
    Support for the pre-Darwinian Conception of Evolution by Natural Law,” Journal
    of Theoretical Biology
    219 (2002): 325-342.

  • Sarah A. Mims
    and Forrest M. Mims III, “Fungal spores are transported long distances in smoke
    from biomass fires,” Atmospheric Environment 38 (2004): 651-655.

  • Meyer, S. C. “DNA
    and the origin of life: Information, specification and explanation,” Darwinism, Design, and Public Education (DDPE)
    Pp. 223-285.

  • Behe, M. J., >Design
    in the details: The origin of biomolecular machines. DDPE Pp. 287-302

  • Nelson, P. &
    J. Wells, >Homology in biology: Problem for naturalistic science and prospect
    for intelligent design, DDPE, Pp. 303-322.

  • Meyer, S. C.,
    Ross, M., Nelson, P. & P. Chien, The Cambrian explosion: biology’s big
    bang, DDPE, Pp. 323-402.

  • Dembski, W.A., Reinstating
    design within science, DDPE, Pp. 403-418.

  • Scott Minnich
    and Stephen C. Meyer, “Genetic Analysis of Coordinate Flagellar and Type III
    Regulatory Circuits,” Proceedings of the Second International Conference on
    Design & Nature
    , Rhodes Greece, edited by M.W. Collins and C.A. Brebbia
    (WIT Press, 2004).

  • W.A. Dembski, The
    Design Inference: Eliminating Chance through Small Probabilities

    (Cambridge: Cambridge University Press, 1998).

  • Michael Behe, Darwin’s
    Black Box: The Biochemical Challenge to Evolution
    (The Free Press, 1996).

  • Charles B.
    Thaxton, Walter L. Bradley, Roger L. Olsen, The Mystery of Life’s Origin:
    Reassessing Current Theories
    (Philosophical Library, 1984, Lewis &
    Stanley, 4th ed., 1992).

  • John Angus
    Campbell and Stephen C. Meyer, Darwinism, Design, & Public Education
    (Michigan
    State University
    Press, 2003)

  • Guillermo Gonzalez
    and Jay W. Richards, The Privileged Planet: How Our Place in the Cosmos is
    Designed for Discovery
    (Regnery Publishing, 2004).

  • William Dembski,
    No Free Lunch: Why Specified Complexity Cannot be Purchased without
    Intelligence
    (Rowman & Littlefield Publishers, 2002).

  • Michael Denton, Evolution:
    A Theory in Crisis
    (Adler & Adler, 1985).

  • Dembksi, W.A., The
    logical underpinnings of intelligent design, Debating Design (Cambridge University Press, 2004), Pp.311-330.

  • Bradley, W. L., Information,
    Entropy, and the Origin of Life, Debating Design (Cambridge University Press, 2004), Pp. 331-351.

  • Behe, M., Irreducible
    complexity: obstacle to Darwinian evolution, Debating Design (Cambridge University Press, 2004), Pp. 352-370.

  • Meyer, S. C., The
    Cambrian information explosion: evidence for intelligent design, Debating Design (Cambridge University Press, 2004), Pg. 371-391.

  • “However, this is like resignedly saying, ‘I don’t
    know!’ Do we really want our children to just accept that the natural world
    is too complex to understand, and that the idea of an intelligent designer is
    sufficient to satisfy our curiosity about such things as the structure and
    function of DNA, genes, cells and organisms?” Tom Demere, paleontologist,
    San Diego Name Natural History Museum)




    Response: Intelligent design theory is not just giving up and then appealing to a
    designer.  Philosophers often use the
    "correspondence theory of truth" truth to describe the aim of
    science. According to the "correspondence theory of truth," something
    is true if it corresponds to an actual fact. Science is supposed to discover
    things which correspond to facts. If it is true that intelligent design is a
    cause in the origin and diversification of life on earth, then to not consider
    intelligent design would be to cause science to not correspond to a fact about
    the origin and diversification of life on earth. To fail to consider
    intelligent design as a cause in the origin and diversification of life on
    earth would be to "stop" science from fulfilling its goal to develop
    better and more accurate explanations for the causes of natural phenomena.

    Furthermore,
    intelligent design is not just based upon giving up on naturalistic
    explanations.  Intelligent design is a
    casually adequate explanation for the origin of biological complexity: we infer design because we have positive predictions that a
    designer can create the type of complexity found in the cell. Stephen C. Meyer explains:


    “Experience teaches
    that information-rich systems … invariably result from intelligent causes, not
    naturalistic ones. … Finding the best explanation, however, requires invoking
    causes that have the power to produce the effect in question. When it comes to
    information, we know of only one such cause. For this reason, the biology of
    the information age now requires a new science of design.” [76]



    “Agents can arrange
    matter with distant goals in mind. In their use of language, they routinely
    ‘find’ highly isolated and improbable functional sequences amid vast spaces of
    combinatorial possibilities.”[77]



    “Indeed, in all
    cases where we know the causal origin of ‘high information content,’ experience
    has shown that intelligent design played a causal role."[78]

    Thus, intelligent
    design is not based upon “giving up” but rather is based upon our understanding
    of how intelligent agents operate, and our recognizing that they may be the
    best explanation for the origin of various aspects of complexity in nature.
     



    Fears over intelligent design often come from the claim that
    intelligent design would mean "giving up" on evolution, or the end of
    scientific investigation. These objections may be less visible to the public
    eye, but are at least equally important in the mind of the scientist. Biologist
    Rudolph Raff objects to design theory saying, "as the influence of the
    intelligent designer grows … the relationships between the phenomena and
    explanations becomes increasingly arbitrary … [until] one reaches a point where
    all biological features are ‘special creations’ and other explanations become
    unnecessary."[79] Here, Raff is not necessarily afraid that we are mixing science with
    religion, but that design is a sort of "science stopper." In fact,
    design theorist William Dembski sees Raff’s arguments as typifying the reasons
    for the exclusion of design from science:

    “What has kept design outside
    the scientific mainstream these last 130 years is the absence of precise
    methods for distinguishing intelligently caused objects from unintelligently
    caused ones. For design to be a fruitful scientific theory, scientists have to
    be sure they can reliably determine whether something is designed. Johannes
    Kepler, for instance, thought the craters on the moon were intelligently
    designed by moon dwellers. We now know the craters were formed naturally. This
    fear of falsely attributing something to design only to have it overturned
    later has prevented design from entering science proper."[80]

    Dembski
    understands Raff’s sort of concerns. What would solve Raff’s problem, however,
    would be a rigorous criteria which allows scientists to know when to detect and
    infer design, and when not to. If such a method could be found, then what is
    best explained naturally remains explained naturally, while what is best
    explained through design, becomes explained through design. As Dembski
    subsequently says, "[w]ith precise methods for discriminating
    intelligently from unintelligently caused objects, scientists are now able to
    avoid Kepler’s mistake." (Dembsk in Mere Creation)



    In calling what
    Kepler did a "mistake," Dembski shows that he doesn’t want
    intelligent design theory to take over biology or all of science science.
    Intelligent design theorists want design to be inferred where the evidence
    warrants–no more, and no less. The methods of ID theorists ensure that we will
    exclusively infer design only if it appears to be what is produced by an
    intelligent agent, and we know that other causal mechanisms are incapable of
    producing the data. If the evidence points to evolution, and that has
    non-scientific religious implications away from theism, so be it. If the
    empirical evidence points to design so be it. The important thing is to follow
    the evidence wherever it leads! That’s the glory of science!




    Avenues of Research Opened by intelligent design
    theory:

    William
    Dembski  offers the following
    philosophical and/or scientific avenues of investigation that could follow from
    research into intelligent design theory:[81]


    • 1. Detectability Problem
    — How is design detected?
    • 2. Functionality Problem — What
    is a designed object’s function?
    • 3. Transmission Problem — How
    does an object’s design trace back historically? (search for narrative)
    • 4. Construction Problem — How
    was a designed object constructed?
    • 5. Reverse-Engineering Problem —
    How could a designed object have been constructed?
    • 6. Perturbation Problem — How
    has the original design been modified and what factors have been modified?
    • 7. Variability Problem — What
    degree of perturbation allows continued functioning?
    • 8. Restoration Problem — Once
    perturbed, how can original design be recovered?
    • 9. Constraints Problem — What
    are the constraints within which a designed object functions well and outside
    of which it breaks?
    • 10. Optimality Problem — In what
    way is the design optimal?
    • 11. Ethical Problem — Is the
    design morally right?
    • 12. Aesthetic Problem — Is the
    design beautiful?
    • 13. Intentionality Problem —
    What was the intention of the designer?
    • 14. Identity Problem — Who is
    the designer?

    Elsewhere,
    Dembski outlined a research program for design in detail in “Three Frequently Asked Questions about
    Intelligent Design”:[82]


    What research topics does a design-theoretic research
    program?




    • Methods of Design Detection.
    Methods of design detection are widely employed in various special sciences
    (e.g., archeology, cryptography, and the Search for Extraterrestrial
    Intelligence or SETI). Design theorists investigate the scope and validity of
    such methods.



    • Biological Information. What is
    the nature of biological information? How do function and fitness relate to it?
    What are the obstacles that face material mechanisms in attempting to generate
    biological information? What are the theoretical and empirical grounds for
    thinking that intelligence is indispensable to the origin of biological
    information?


    • Evolvability. Evolutionary biology’s
    preferred research strategy consists in taking distinct biological systems and
    finding similarities that might be the result of a common evolutionary
    ancestor. Intelligent design, by contrast, focuses on a different strategy,
    namely, taking individual biological systems and perturbing them (both
    intelligently and randomly) to see how much the systems can evolve. Within this
    latter research strategy, limitations on evolvability by material mechanisms
    constitute indirect confirmation of design.



    • Evolutionary Computation.
    Organisms employ evolutionary computation to solve many of the tasks of living
    (cf. the immune system in vertebrates). But does this show that organisms
    originate through some form of evolutionary computation (as through a Darwinian
    evolutionary process)? Are GPGAs (General Purpose Genetic Algorithms) like the
    immune system designed or the result of evolutionary computation? Need these be
    mutually exclusive? Evolutionary computation occurs in the behavioral
    repertoire of organisms but is also used to account for the origination of
    certain features of organisms. Design theorists explore the relationship
    between these two types of evolutionary computation as well as any design
    intrinsic to them. One aspect of this research is writing and running computer
    simulations that investigate the scope and limits of evolutionary computation.
    One such simulation is the MESA
    program (Monotonic Evolutionary Simulation Algorithm) by William Dembski. It is available online at www.iscid.org/mesa.



    • Technological Evolution (TRIZ).
    The only well-documented example we have of the evolution of complex multipart
    integrated functional systems (as we see in biology) is the technological
    evolution of human inventions. In the second half of the twentieth century,
    Russian scientists and engineers studied hundreds of thousands of patents to
    determine how technologies evolve. They codified their findings in a theory to
    which they gave the acronym TRIZ, which in English translates to Theory of
    Inventive Problem Solving (see Semyon 3 Savransky, Engineering of Creativity:
    Introduction to TRIZ Methodology of Inventive Problem Solving, CRC Publishers,
    2000). The picture of technological evolution that emerges out of TRIZ
    parallels remarkably the history of life as we see it in the fossil record and
    includes the following: (1) New technologies (cf. major groups like phyla and
    classes) emerge suddenly as solutions to inventive problems. Such solutions
    require major conceptual leaps (i.e., design). As soon as a useful new
    technology is developed, it is applied immediately and as widely as possible
    (cf. convergent evolution). (2) Existing technologies (cf. species and genera)
    can, by contrast, be modified by trial-anderror tinkering (cf. Darwinian
    evolution), which amounts to solving routine problems rather than inventive
    problems. (The distinction between routine and inventive problems is central to
    TRIZ. In biology, irreducible complexity suggests one way of making the
    analytic cut between these types of problems. Are there other ways?) (3)
    Technologies approach ideality (cf. local optimization by means of natural
    selection) and thereafter tend not change (cf. stasis). (4) New technologies,
    by supplanting old technologies, can upset the ideality and stasis of the old
    technologies, thus forcing them to evolve in new directions (requiring the
    solution of new inventive problems, as in an arms race) or by driving them to
    extinction. Mapping TRIZ onto biological evolution provides a especially promising
    avenue of design theoretic research.



    • Strong Irreducible Complexity of
    Molecular Machines and Metabolic Pathways. For certain enzymes (which are
    themselves highly complicated molecular structures) and metabolic pathways
    (i.e., systems of enzymes where one enzyme passes off its product to the next,
    as in a production line), simplification leads not to different functions but
    to the complete absence of all function. Systems with this feature exhibit a
    strengthened form of irreducible complexity. Strong irreducible complexity, as
    it may be called, entails that no Darwinian account can in principle be given
    for the emergence of such systems. Theodosius Dobzhansky, one of the founders
    of the neo-Darwinian synthesis, once remarked that to talk about prebiotic
    natural selection is a contradiction in terms—the idea being that selection
    could only select for things that are already functional. Research on strong
    irreducible complexity finds and analyzes biological systems that cannot in
    principle be grist for natural selection’s mill. For this research, which is
    only now beginning, to be completely successful would imply the unraveling of
    molecular Darwinism.



    • Natural and Artificial Biological
    Design (Bioterrorist Genetic Engineering). We are on the cusp of a
    bioengineering revolution whose fallout is likely to include bioterrorism. Thus
    we can expect to see bioterror forensics emerge as a practical scientific
    discipline. How will such forensic experts distinguish the terrorists’
    biological designs from naturally occurring biological designs?




    • Design of the Environment and
    Ecological Fine-Tuning. The idea that ecosystems are fine-tuned to support a
    harmonious balance of plant and animal life is old. How does this balance come
    about. Is it the result of blind Darwinian forces competing with one another
    and leading to a stable equilibrium? Or is there design built into such
    ecosystems? Can such ecosystems be improved through conscious design or is
    “monkeying” with such systems invariably counterproductive? Design-theoretic
    research promises to become a significant factor in scientific debates over the
    environment.



    • Steganographic Layering of
    Biological Information. Steganography belongs to the field of digital data
    embedding technologies (DDET), which also include information hiding,
    steganalysis, watermarking, embedded data extraction, and digital data
    forensics. 4 Steganography seeks efficient (high data rate) and robust
    (insensitive to common distortions) algorithms that can embed a high volume of
    hidden message bits within a cover message (typically imagery, video, or audio)
    without their presence being detected. Conversely, steganalysis seeks
    statistical tests that will detect the presence of steganography in a cover
    message. Key research question: To what degree do biological systems
    incorporate steganography, and if so, is biosteganography demonstrably
    designed?



    • Cosmological Fine-Tuning and
    Anthropic Coincidences. Although this is a well worn area of study, there are
    some new developments here. Guillermo Gonzalez, assistant professor of physics
    and astronomy at Iowa State University, and Jay Richards, a senior fellow with
    Seattle’s Discovery Institute, have a forthcoming book titled The Privileged
    Planet (along with a video based on the book) in which they make a case for
    planet earth as intelligently designed not only for life but also for
    scientific discovery. In other words, they argue that our world is designed to
    facilitate the scientific discovery of its own design. Aspects of Gonzalez’s
    work in this area have been featured on the cover story of the October 2001
    Scientific American.



    • Astrobiology, SETI, and the Search
    for a General Biology. What might life on other planets look like? Is it
    realistic to think that there is life, and even conscious life, on other
    planets? What are the defining features that any material system must possess
    to be alive? How simple can a material system be and still be alive (John von
    Neumann posed this question over half a century ago in the context of cellular
    automata)? Insofar as such systemsdisplay intelligent behavior, must that
    intelligence be derived entirely from its material constitution or can it
    transcend yet nevertheless guide its behavior (cf. the mechanism vs. vitalism
    debate)? Is there a testable way to decide this last question? How, if at all,
    does quantum mechanics challenge a purely mechanistic conception of life?
    Design theorists are starting to investigate these questions.



    • Consciousness, Free Will, and
    Mind-Brain Studies. Is conscious will an illusion—we think that we have acted
    freely and deliberately toward some end, but in fact our brain acted on its own
    and then deceived us into thinking that we acted deliberately. This is the
    majority position in the cognitive neuroscience community, and a recent book
    makes just that claim in its title: The Illusion of Conscious Will by Harvard
    psychologist Daniel Wegner. But there is now growing evidence that
    consciousness is not reducible to material processes of the brain and that free
    will is in fact real. Jeffrey Schwartz at UCLA along with quantum physicist
    Henry Stapp at the Lawrence Berkeley National Laboratory are two of the key
    researchers presently providing experimental and theoretical support for the
    irreducibility of mind to brain (see Schwartz’s book The Mind and the Brain:
    Neuroplasticity and the Power of Mental Force).



    • Autonomy vs. Guidance. Many scientists worry that intelligent design attempts
    to usurp nature’s autonomy. But that is not the case. Intelligent design is
    attempting to restore a proper balance between nature’s autonomy and teleologic
    guidance. Prior to the rise of modern science all the emphasis was on
    teleologic guidance (typically in the form of divine design). Now the pendulum
    has swung to the opposite extreme, and all the emphasis is on nature’s autonomy
    (an absolute autonomy that excludes design). Where is the point of balance that
    properly respects both, and in which design becomes empirically evident? The
    search for that balance-point underlies all design-theoretic research. It’s not
    all design or all nature but a synergy of the two. Unpacking that synergy is
    the intelligent design research program in a nutshell.


    Thus it can be seen that intelligent design opens up many avenues of research and will in no way stifle scientific investigation. Besides, if it is the accurate description of how life got here, then we should invoke it no matter what the practical consequences may be! In fact, failure to invoke ID may have already hurt scientific progress very badly.
    In 2003, Scientific American published an extensive article discussing how much “junk-DNA” may have functionality. (“The Gems of “Junk” DNA,” Scientific American, Nov. 2003, by W. Wayt Gibbs.) The upshot of the article is that some types of DNA which biologists now see as playing important functional roles in the cell “were immediately assumed to be evolutionary junk” and “long ago written off as irrelevant because they yield no proteins.” (emphasis added) The article states that the “assumption [that the DNA was junk] was too hasty” and “[t]he failure to recognize the importance of introns ‘may well go down as one of the biggest mistakes in the history of molecular biology.’” (emphasis added) If the article is correct, then evolutionary assumptions caused “one of the biggest mistakes in the history of molecular biology.” (emphasis added)



    This incident shows that sometimes expectations and predictions from evolutionary theory may be slowing scientific research. Had intelligent design expectations been at work, we might have had quicker insights the workings of genetics which might even lead to medical advances! Had scientists considered intelligent design, then they may have taken seriously the possibility that these introns had function, and perhaps science would have advanced much quicker in our understanding of the function of various types of non-coding DNA.



    Intelligent design has recently led to insight about the workings of centrioles in the cell. Jonathan Wells writes how he used design expectations to analyze centrioles in the cell:

    “Instead of viewing centrioles through the spectacles of molecular reductionism and neo-Darwinism, this hypothesis assumes that they are holistically designed to be turbines. Orthogonally oriented centriolar turbines could generate oscillations in spindle microtubules that resemble the motion produced by a laboratory vortexer.” (Jonathan Wells, “Do Centrioles Generate a Polar Ejection Force? Rivista di Biologia/Biology
    Forum
    98 (2005): 37-62.)

    Thus, using a design-engineering approach to biology could lead insights into the workings of the cell. This ID-based insight even has potential applications to better understanding causes of cancer!



    “Do we also want our future scientists to be reluctant to
    tenaciously investigate the natural world no matter what discoveries and
    conclusions they reach and no matter what philosophical ideas of design and
    purpose are rejected? If we as a society answer "Yes," to these
    questions, then I suppose we are also willing to accept Faith Healing 101 as a
    legitimate course in medical schools.”  (Tom Demere, paleontologist,
    San Diego Natural History Museum)



    Response: As noted, intelligent design is not based upon “faith” but is based upon empirical
    observations of how intelligent agents operate, and studies of natural objects
    to determine if those objects contain the tell-tale signs that an intelligent
    agent had been at work. Such a scientific study requires tenacious
    investigation.  Thus, there is no danger that teaching students about the empirical validity ID would lead to the advocation of religious ideas such as faith healing. In fact, as William Dembski writes, a science curriculum teaching ID would not look very different from current science curricula:

    “One of the worries about intelligent design is that it will jettison much of what is accepted in science, and that an “ID-based curriculum” will look very different from current science curricula. Although intelligent design has radical implications for science, I submit that it does not have nearly as radical implications for science education. First off, intelligent design is not a form of anti-evolutionism. Intelligent design does not claim that living things came together suddenly in their present form through the efforts of a supernatural creator. Intelligent design is not and never will be a doctrine of creation.”[14]

    Dr. Demere writes about the need for students to “investigate the natural world no matter what discoveries and conclusions they reach and no matter what philosophical ideas of design and purpose are rejected.” Yet precisely same charge can be made, with much more force, against evolutioists who are unwilling to follow the evidence where it leads, to design, because they themselves refuse to consider design because of naturalistic assumptions inherent in their own approach to origins. We must be willing to follow the evidence where it leads and consider intelligent design no matter what discoveries and conclusions scientists reach and no matter what philosophical ideas about lack-of-design or purposelessness are rejected.



    Unfotunately, it is exceedingly clear that many scientists reject design a prior not because of evidence, but because of their own philosophical assumptions. Consider these quotes from Darwinists who reject design not because of evidence, but because of naturalistic assumptions they are invoking:

    “[I]f a living cell were to be made in the laboratory, it would not prove that nature followed the same pathway billions of years ago. But it is the job of science to provide plausible natural explanations for natural phenomena.” (Science and Creationism, A View from the National Academy of Sciences, 2nd Edition (1999), emphasis added)



    “The statements of science must invoke only natural things and processes. … The theory of evolution is one of these explanations.”(Teaching About Evolution and the Nature of Science, National Academy Press, 1998, pg. 42, emphasis added)



    “It was Darwin’s greatest accomplishment to show that the directive organization of living beings can be explained as the result of a natural process, natural selection, without any need to resort to a Creator or other external agent…[Darwin’s] mechanism, natural selection, excluded God as the explanation…” (Francisco Ayala [evolutionist scientist], “Darwin’s Revolution,” in Creative Evolution?!, eds. J. Campbell and J. Schopf (Boston, Mass.: Jones and Bartlett Publishers, 1994), pp. 4-5, emphasis added)



    “Science, fundamentally, is a game. It is a game with one overriding and defining rule. Rule No. 1: Let us see how far and to what extent we can explain the behavior of the physical and material universe in terms of purely physical and material causes, without invoking the supernatural.” (Richard E. Dickerson [evolutionist scientist]: “The Game of Science.” Perspectives on Science and Faith (Volume 44, June 1992), p. 137, emphasis added)



    “Darwinism rejects all supernatural phenomena and causations. The theory of evolution by natural selection explains the adaptedness and diversity of the world solely materialistically.” (“Darwin’s Influence on Modern Thought” E. Mayr [evolutionist scientist], Scientific American, pg. 82-83, (July 2000), emphasis added)



    “[F]or many evolutionists, evolution has functioned as something with elements which are, let us say, akin to being a secular religion … [A]t some very basic level, evolution as a scientific theory makes a commitment to a kind of naturalism, namely, that at some level one is going to exclude miracles and these sorts of things come what may.” (“Nonliteralist Antievolution,” Ruse, Michael [evolutionist philosopher of science], AAAS Symposium: “The New Antievolutionism,” February, 1993, Boston, MA., emphasis added)



    “[W]e have a prior commitment, a commitment to materialism. It is not that the methods and institutions of science somehow compel us to accept a material explanation of the phenomenal world, but, on the contrary, that we are forced by our a priori adherence to material causes to create an apparatus of investigation and a set of concepts that produce material explanations…that materialism is absolute, for we cannot allow a Divine Foot in the door.” (Lewontin, Richard [evolutionist scientist], “Billions and Billions of Demons”, New York Review of Books, January 9, 1997, p. 28., emphasis added)



    “If there is one rule, one criterion that makes an idea scientific, it is that it must invoke naturalistic explanations for phenomena … it’s simply a matter of definition—of what is science, and what is not.” (Eldredge, Niles, 1982, The Monkey Business: A Scientist Looks at Creationism, Washington Square Press)



    “…any statement concerning the existence, nonexistence, or nature of a creator or creators is not science by definition and has no place in scientific discussion.”
    (Pine, R.H., 1984, “But Some of Them Are Scientists, Aren’t They?” Creation/Evolution, Issue XIV, pp. 6-18)

    Thus, it is clearly seen that many evolutionists reject design not because of the evidence, but because of their own philosophical assumptions. Dr. Demere is thus correct: we should not be teaching students to make scientific conclusions because of philosophy. Rather, we should be teaching students to follow the evidence wherever it leads without making any philosophical assumptions. Once freed from the philosophical shackles of naturalism, science will be in a position where it can seriously consider the empirical evidence for design.



    Intelligent design proponents would thus agree with Dr. Demere’s comments about the need to let the evidence–not philosophical preferences–guide our research. After all, it was ID proponents who drafted and submitted the “Santorum Resolution” to the U.S. Senate, which sanctioned helping students to recognize when philosophical claims are being made rather than letting the scientific data speak for itself:
    “It is the sense of the Senate that:  (1) good science education
    should prepare students to distinguish the data
    or testable theories of science from
    philosophical or religious claims that are made in the
    name of science…[74]

    Given that ID proponents submitted such legislation to guide curricula on the national level, it seems unlikely that ID proponents are interested in forcing philosophical claims upon science. This resolution, which also sanctioned critical analysis of Darwin’s theory in the science classroom, passed with overwhelming a bi-partisan support by a vote of 91-8. To reiterate, we must be willing to follow the evidence where it leads and consider intelligent design no matter what discoveries and conclusions scientists reach and no matter what philosophical ideas about lack-of-design or purposelessness are rejected.



    Response to Comments by Michael Mayer:



    “I don’t know of any working scientist who is ready to
    throw in the towel on any question regarding the life sciences or physical
    sciences. Certainly, historical events that were not witnessed can never be
    understood with absolute certainty, but that doesn’t mean we can’t study them,
    test hypotheses or construct the most likely interpretation of them.” (Michael Mayer, associate; professor of
    biology, USD)




    Response: To
    reiterate, intelligent design is not “throwing in the towel.” Rather, it is
    acknowledging that various features of nature match what we would expect to
    find based upon our studies of what intelligent agents tend to produce.
       Dr. Mayer is absolutely correct to state
    that “historical events that were not witnessed can never be understood with
    absolute certainty, but that doesn’t mean we can’t study them, test hypotheses
    or construct the most likely interpretation of them” and this is precisely why
    intelligent design is a viable scientific hypothesis.
      We can look at various aspects of nature and
    ask “would intelligent design, as an event in the history of life, be the best
    explanation to account for the origin of this structure?”
      Intelligent design asks this simple and
    compelling question—and simply asks scientists to be willing to follow the
    evidence wherever it leads!



    Response to Comments by Michael Simpson:



    “I believe this is basically a religious or faith question. It seems
    to me that many who support this notion of intelligent design are doing so to
    bolster their own religious beliefs, specifically that there is a God, a divine
    creator. They are disturbed and angry and frightened that what is central in
    their lives is not generally taught or even mentioned in public schools, and
    they might view science in general (and evolutionary theory specifically) as a
    threat, e.g., to a particular set of religious beliefs.
      I do respect those who are searching for
    something beyond themselves, something meaningful in their lives. This is part
    of the human quest, to seek the mystery of existence. It is a noble and worthy
    goal. But, it is also important to have clear and critical thinking, a means of
    checking ourselves, detecting bias against preconceived notions. There is a
    great deal of hokum out there. A few hundred years ago, the majority of people
    in the Western world believed in demons and regularly used them and other
    superstitious beliefs to justify their behavior and power over others.
      I think it is possible to be both spiritual
    and a critical thinker: To use one’s mind (the scientific method and common
    sense) in evaluating specific beliefs or claims or ideas, and yet to also seek
    that question of existence and continually embrace the wonder and awesome
    mystery of this world.”  (Michael Simpson, professor of biology, SDSU)




    Response: Dr.
    Simpson gets some things wrong here, but also gets many things right here.
      He is wrong to think that intelligent design
    is based upon superstition or that it is “hokum.”
      Intelligent design is based upon empirical
    arguments which use the scientific method. 
    Intelligent design proponents make their arguments for scientific
    reasons, and do not base their arguments upon religions assumptions.
     


    However, Dr. Simpson is right that for many people, this is a religious/faith
    question.  For example, prominent
    evolutionary scientists Stephen Jay Gould and Richard Dawkins rely upon their
    belief in evolution to bolster their materialist worldviews.
     
    “Materialism” entails the belief that nothing other than the
    blind and unguided forces of nature are responsible for our existence.
     For years, some leading scientific promoters of evolution have advocated
    that humanity is “the result of a purposeless and natural process that did not
    have [us] in mind.”[83] Not all evolutionist scientists project such
    theological views on to their science, but a significant contingency of
    prominent Darwinists have advocated this ideology.


    The late paleontologist Stephen Jay Gould profoundly
    impacted American science education, yet himself wrote that
    Darwin “took away our status as paragons
    created in the image of God.”[84]
    According to Gould, although “we may yearn for a ‘higher’ answer” than
    evolution, in fact, “none exists.”[85]
      Intellectuals on the other side of the
    Atlantic seem to concur. 
    Richard Dawkins, the Charles Simonyi Professor of the Public
    Understanding of Science at Oxford
    University, presses the public to understand that “
    Darwin made it possible
    to be an intellectually fulfilled atheist.”[86]
     




    Simpson is also right that the way evolution is presented in
    schools sometimes genuinely threatens the religious beliefs of some
    students.  Unfortunately, the notion that
    evolution has ideological implications resides not only in the minds of the
    scientific elite.  In 1995, the National
    Association of Biology Teachers (NABT) called 
    evolution an “unsupervised, impersonal, unpredictable and natural
    process.”[87]
      So explicit was this theological language
    that Eugenie Scott had to lobby the NABT to change its definition so the
    teaching of evolution would not be threatened[88]
    because it so clearly was putting anti-theistic theology into schools.




    Unfortunately, the NABT’s mindset has infiltrated
    textbooks.  Miller and Levine’s
    Biology once explained that the
    evolutionary processes which created us are “random and undirected” and “wor[k]
    without either plan or purpose.”[89]
     A popular college textbook, Evolutionary
    Biology, explicitly promotes ideology: “By coupling undirected, purposeless
    variation to the blind, uncaring process of natural selection,
    Darwin made theological or spiritual
    explanations of the life processes superfluous. …
    Darwin’s theory of evolution … provided a
    crucial plank in the platform of mechanism and materialism…”[90]




    Admittedly, Dawkins, Gould, and Futuyma represent an extreme
    end of the spectrum. Polls of scientists consistently reveal that many find
    room to believe in both God and evolution. 
    Additionally, the field of evolutionary biology has a strong scientific
    basis and many of its researchers do legitimate and fruitful work without any
    ideological bent.  Yet with such a cadre
    of prominent Darwinists telling the public that evolution makes God irrelevant,
    there is no doubt that much ideology orbits the promotion of Darwin’s theory.[91]
      Perhaps this explains why a 1999 poll of
    biologists elected to the National Academy of Scientists found that over 95%
    professed no belief in God.[92]




    Dr. Simpson is also correct that we need to be informed and critical thinkers.  This is why it is crucial that students learn to approach Darwin’s theory with a critical mindset and not simply memorize it as blind fact. The National Science Education Standards concur with this approach in that they recommend that students engage in “identification of assumptions, use of critical and logical
      thinking, and consideration of alternative
    explanations.”[73] Regarding the need to be informed, Dr. Simpson’s tone is ironic
    given that few of the scientists quoted on intelligent design in this article seem to actually
    be capable of accurately describing intelligent design theory.  Additionally, he is very correct that we need to correct our own biases.



    In 2001, ID proponents submitted to the U.S. Senate a resolution which
    encouraged that students need to learn to distinguish between religion or
    philosophy disguised as science, and genuine scientific claims.
      This “Santorum Amendment” passed with
    overwhelming bipartisan support and stated that students should learn
      “to distinguish the data or testable
    theories  of science from philosophical
    or religious claims that are made in the 
    name of science.” Thus, ID proponents want students to not learn philosophy in the name of science. Indeed, ID proponents submitted this legislation to the U.S. Senate. However, it seems that some of those quoted in this article have harsh biases against intelligent design.



    Additionally, it is very possible to be a critical thinker and a spiritual person at
    the same time.  In fact, many ID
    proponents encourage thinking critically about
    Darwin’s theory and themselves are quite
    spiritual in their outlook on life. 
    Interestingly, however, many of the scientists quoted in the Union
    Tribune article were unwilling or incapable of thinking critically about Neo-Darwinism.
    Thus, Dr. Simpson’s words should be heeded by all.
      Evolutionists included.
     


    Thank you very much for reading!

    -IDEA Center Staff



    References Cited:


    [2] Stephen C. Meyer, "The Explanatory Power of
    Design," in Mere Creation, pg. 140 (William A. Dembski ed., InterVarsity Press 1998).

    [3] Stephen C. Meyer, “The Cambrian Information Explosion,” Debating Design, pg. 388 (Dembski and Ruse eds., Cambridge University Press 2004).

    [4]
    Stephen C. Meyer, DNA and Other Designs. (http://www.arn.org/docs/meyer/sm_dnaotherdesigns.htm)

    [5]
    (Meyer S. C. et. al., "The Cambrian Explosion:
    Biology’s Big Bang," in Darwinism, Design, and Public Education,
    edited by J. A. Campbell and S. C. Meyer (Michigan State University Press,
    2003)

    [6]
    (Nelson and Wells, Homology in Biology, in Darwinism,
    Design, and Public Education
    , pg. 316, 318 (John Angus Campbell, ed. Michigan State University Press 2003).

    [7] See Edwards v. Aguillard, 482 U.S. 578 (1987).

    [8] William Dembski, The Design Revolution, pg. 42.

    [9] Of Pandas and People (2nd ed, 1993), pg. 7,
    emphasis added.

    [10] Of Pandas and People (2nd ed, 1993), pg. 126-127, emphasis added.

    [11] Of Pandas and People (2nd ed, 1993), pg. 161, emphasis added.

    [12] Michael Behe, "The Modern Intelligent Design
    Hypothesis," Philosophia Christi, Series 2, Vol. 3, No. 1 (2001),
    pg. 165, emphasis added.

    [13] Michael Behe, Pittsburgh Post-Gazette, 02/08/01.

    [14] William Dembski, No Free Lunch, pg. 314, emphasis added.

    [15] Michael Behe, Darwin’s Black Box, pg. 197.

    [16] William Dembski, The Design Revolution, pg. 40.

    [17] William Dembski, The Design Revolution, pg. 42-43.

    [19] William Dembski, The Design Revolution, pg. 42-43.

    [20] William Dembski, No Free Lunch, pg. 223.

    [21] William Dembski, The Design Revolution, pg. 42-43.

    [22] Richard Dawkins, The Blind Watchmaker, pg. 18 (W.W. Norton, 1996 edition.

    [23]
    “The origin of biological information and the higher
    taxonomic categories," by Stephen C. Meyer,
    Proceedings of the Biological Society of
    Washington
    117(2) (August, 2004):213-39

    [24] See M.J. Behe and D.W. Snoke, “Simulating
    Evolution by Gene Duplication of Protein Features That Require Multiple Amino
    Acid Residues,” Protein Science, 13 (2004): 2651-2664.

    [25] Eldredge, N., Reinventing Darwin, p. 95 (1995)

    [26]
    Carroll, R., Patterns and Processes of Vertebrate Evolution, pgs. 8-10 (1997).

    [27] Pagel M., "Happy accidents?," Nature, Vol
    397, pg. 665 (February 25, 1999).

    [28] Mayr, E., What Evolution Is, pg. 189 (2001).

    [29] Denton, M., Evolution: A Theory in Crisis, pg. 193 (1986).

    [30]
    Ohno, S., "The notion of the Cambrian
    pananimalia genome," Proc. Nat. Acad. Sci. USA, Vol 93 pg. 8475-8478
    (August 1996).

    [31]
    Barnes, R.S.K., P. Calow, P.J.W. Olive, D.W. Golding,
    J.I. Spicer. The Invertebrates: A New Synthesis 3rd Ed. (2001)

    [32] Richard Dawkins, The Blind Watchmaker, pg. 229
    (W.W. Norton, 1996 edition).

    [33] William Dembski, The Design Revolution, pg. 45.

    [34] Dembski, The Design Revolution, pg. 45.

    [35]
    Stephen C. Meyer, "The Explanatory Power of
    Design," in Mere Creation, pg. 140 (William A. Dembski ed.,
    InterVarsity Press 1998).

    [36] Stephen C. Meyer, “The Cambrian Information
    Explosion,” Debating Design, pg. 388 (Dembski and Ruse
    eds., Cambridge University Press 2004).

    [37] Stephen C. Meyer, DNA and Other
    Designs
    . (http://www.arn.org/docs/meyer/sm_dnaotherdesigns.htm)

    [38]
    Richard Dawkins, The Blind Watchmaker, pg. 230.

    [39] Richard
    Dawkins, The Blind Watchmaker, pg. 6.

    [40] William Dembski, The Design Revolution, pg. 46.

    [41] Stephen C. Meyer, DNA and Other Designs,
    http://www.arn.org/docs/meyer/sm_dnaotherdesigns.htm.

    [42] Senior writer for Scientific American, John Horgan, The End of Science: Facing the Limits of Knowledge in the Twilight of the Scientific Age, Little, Brown & Co: London, 1997, p138.

    [43]
    Dose, Klaus, "The Origin of Life: More Questions Than Answers," Interdisciplinary Science Reviews, Vol. 13, No. 4, 1988,
    p.348.

    [44] Charles Darwin, The Origin of Species, ed. J. W. Burrow
    (London: Penguin Group, 1985), (1859), 219.

    [46]
    "Prebiotic Synthesis in Atmospheres Containing CH4, CO, and CO2"
    by S. Miller, G. Schlesinger, Journal of Molecular Evolution 19:376-382 (1983)

    [47] The Origins of Life on the Earth, by S. L. Miller and L. E. Orgel, p. 33 (Englewood Cliffs, Prentice Halt, 1974)

    [48]
    "Prebiotic Synthesis in Atmospheres Containing
    CH4, CO, and CO2" by S. Miller, G. Schlesinger, Journal of Molecular
    Evolution
    19:376-382 (1983); The Origins of Life on the Earth, by S. L. Miller
    and L. E. Orgel, p. 33 (Englewood Cliffs, Prentice Halt, 1974)

    [49]
    "Chemical Events on the Primitive Earth,"
    P. Abelson, PNAS USA,
    55:1365-1372 (1966); "Peptides and the Origin of Life," B. M. Rode,
    Peptides, 20:773-776 (1999)

    [50]
    "Prebiotic Synthesis in Atmospheres Containing
    CH4, CO, and CO2" by S. Miller, G. Schlesinger, Journal of Molecular Evolution 19:376-382 (1983)

    [51]
    "Prebiotic Synthesis in Atmospheres Containing
    CH4, CO, and CO2" by S. Miller, G. Schlesinger, Journal of Molecular
    Evolution
    19:376-382 (1983). , Phillip Abelson, "Discussion of a Paper by
    Stanley Miller," Annals of New York Academy of Sciences69 (1957) 274-275);
    Sidney W. Fox & Klause Doxe, Molecular Evolution ahd the Origin of Life,
    Revised ed. (1977); Henrich D. Holland, The Chemical Evolution of the
    Atmosphere and Oceans
    , (1984); Shapiro, R., Origins: A Skeptic’s Guide to the
    Creation of Life on Earth
    (1986).

    [52]
    Statements made by Dr. Edward Peltzer, at the IDEA
    Conference 2002. Dr. Peltzer obtained his doctorate degree under Stanley Miller
    in 1979; Seven Clues to the Origin of Life: A Scientific Detective Story, A.G.
    Cairns-Smith, pg. 44-45 (Cambridge University Press, 1993).

    [53] Levy, Matthew and Stanley Miller. The Stability of the RNA bases: Implications for the origin of life. Proceedings of National Academy of Science, USA (Vol. 95, pg. 7933-7938)

    [54]
    Levy, Matthew and Stanley Miller. The Stability of the RNA
    bases: Implications for the origin of life. Proceedings of National Academy of
    Science, USA (Vol. 95, pg. 7933-7938); Canuto V. M., Levine, J. S., Augustsson,
    T. R., Imhoff, C. L., Giampapa, M. S. "The young Sun and the atmosphere
    and photochemistry of the early Earth". Nature Vol 305, September 22,
    1983, pg. 281-286; Denton,
    Michael. Evolution: A Theory in Crisis (Bethesda, Md.: Adler and Adler, 1985),
    pg. 261)

    [55] The Search for Life’s Origins. National Research Council Space Studies Board, National Academy Press: Washington D.C., 1990, pg. 66, 67, 126).

    [56] Chemical Events on the Primitive Earth," P. Abelson, PNAS USA, 55:1365-1372 (1966).

    [57]
    "The prebiotic synthesis of organic compounds as
    a step toward the origin of life," S. L. Miller, Major Events in the
    History of Life
    (London: Jones and Bartlett Publishers, 1992)

    [58]
    Levy, Matthew and Stanley Miller. The Stability of the RNA
    bases: Implications for the origin of life. Proceedings of National
    Academy of Science, USA
    (Vol. 95, pg. 7933-7938);Lazcano, A., 1997. The tempo and modes of prebiotic evolution. In: Cosmovici,C.B., Bowyer, S., Wertheimer, D. Eds., Astronomical and Biochemical Origins
    and the Search for Life in the Universe
    . Editrice Compositori, pp. 419­430

    [59] Schopf, J. William in Exobiology (edited by Cyril
    Ponnamperuma), North-Holland Publishing Company: Amsterdam-London, 1972 in the
    Precambrian paleobiology chapter, Pg. 27.

    [60]Lasaga, Antonio, H. D. Holland, M. J. Dwyer.
    "Primordial Oil Slick". Science vol 174,
    Oct 4, 1971 pg. 53-55

    [61] Biogenesis: Theories of Life’s Origins,
    N. Lahav, p138-139 (Oxford University Press, 1999).

    [62] "Chemical Events on the Primitive Earth," P. Abelson, PNAS USA, 55:1365-1372 (1966).

    [63]
    The Search for Life’s Origins. National Research
    Council Space Studies Board, National Academy Press: Washington
    D.C., 1990, pg. 66, 67, 126)

    [64] Lewontin, R.,
    "Billions and Billions of Demons," The
    New York Review, January 1997, p. 31.

    [65] The
    Myth of the Flat Earth by Jeffrey Burton Russell, available at http://www.id.ucsb.edu/fscf/LIBRARY/RUSSELL/FlatEarth.html.

    [66] The
    Myth of the Flat Earth by Jeffrey Burton Russell, available at http://www.id.ucsb.edu/fscf/LIBRARY/RUSSELL/FlatEarth.html.

    [67]
    Debating Design (William A. Dembski & Michael Ruse eds., Cambridge University Press 2004). Another similar of a scholarly publication advocating ID theory is William Dembski’s The Design Inference (Cambridge University Press 1998).

    [68]
    Stephen C. Meyer, “The origin of biological information and the higher taxonomic categories," Proceedings of the Biological Society of Washington 117(2) (August,
    2004):213-39; Michael J. Behe and David W. Snoke, “Simulating evolution by gene
    duplication of protein features that require multiple amino acid residues,” Protein Science, 13 (2004); Jonathan
    Wells, “Do Centrioles Generate a Polar Ejection Force,” Rivista di Biologia / Biology Forum 98 (2005):71-96.

    [69] Charles Darwin, The Origin of Species, ed. J. W. Burrow
    (London: Penguin Group, 1985), (1859), 219.

    [70]
    Id.

    [71] Michael J. Behe, Darwin’s
    Black Box
    51-73 (Free Press, 1996).

    [72] Richard Dawkins, The Blind Watchmaker 229 (W.W. Norton, 1996 edition).

    [73] National Research Council, National Science Education Standards (National Academy Press, 1996), 23.

    [74]
    Congressional Record, 107th Cong., 1st sess., 2001,
    pt. 147:S6147-53  (amendment submitted by
    Sen. Santorum); this resolution passed with overwhelming bi-partisan support
    with a vote of 91-8 in the U.S. Senate.

    [75] Charles Darwin, The Origin of Species, ed. J. W.
    Burrow (London: Penguin Group, 1985), (1859), 66.

    [76]
    Stephen C. Meyer, "The Explanatory Power of
    Design," in Mere Creation, pg. 140 (William A. Dembski ed.,
    InterVarsity Press 1998).

    [77] Stephen C. Meyer, “The Cambrian Information Explosion,” Debating Design, pg. 388 (Dembski and Ruse eds., Cambridge University Press 2004.

    [78]
    Stephen C. Meyer, DNA and Other
    Designs
    (http://www.arn.org/docs/meyer/sm_dnaotherdesigns.htm).

    [79]
    Raff, Rudolf A., "The creationist abuse of
    evo-devo." Evol Dev, 3(6): 373-374 (2001).

    [80]
    Dembski, W. A., "Introduction: Mere
    Creation", Mere Creation Science Faith & Intelligent Design,
    (InterVarsity Press, 1998) pg. 16.

    [81]
    Design
    as a Research Program: 14 Questions to Ask About Design

    (http://www.discovery.org/viewDB/index.php3?program=CRSC%20Responses&command=view&id=259

    [82] http://www.designinference.com/documents/2003.09.ID_FAQ.pdf

    [83]
    George Gaylord Simpson,
    The Meaning of Evolution 179 (Yale University Press 1949). While
    Simpson goes on to say that it is “a gross misrepresentation to say we are
    just an accident or
    nothing but an animal,” his ultimate view is that that “[p]lan,
    purpose, goal, all absent in evolution to this point, enter with the coming of
    man and are inherent in the new evolution, which is confined to him.” Whether
    or not such a view is correct, it is strikingly at odds with traditional
    Western theism.


    [84]

    Stephen Jay Gould, Ever Since Darwin 147 (W.W. Norton 1977).


    [85]
    Stephen Jay Gould quoted in
    The Meaning of Life 84 (David Friend and the Editors of Life
    Magazine eds., Little, Brown and Co. 1991).

    [86] Richard Dawkins, The Blind Watchmaker 6 (W.W. Norton, 1996 edition).


    [87]
    See “NABT Unveils New Statement on Teaching
    Evolution,” 58 American Biology Teacher
    61-62 (January, 1996). 


    [88]
    See Karl W. Giberson & Donald A Yerxa,
    Species of Origins America’s Search for a
    Creation Story
    6-7 (Rowman & Littlefield 2002); Michael N. Keas and
    Stephen C. Meyer, The Meaning of
    Evolution
    , discovery.org/scripts.viewDB/filesDB-download.php?id=305 (last
    visited June 14, 2005).


    [89]
    Kenneth R. Miller & Joseph Levine,
    Biology 658 (Prentice Hall 4th ed.
    1998).


    [90]
    Douglas J. Futuyma, Evolutionary Biology 5 (Sinauer Associates Inc., 1998).

    [91] “Theory” is used with the understanding that the
    scientific community generally employs the term according to its technical
    definition as “a well-substantiated explanation of some aspect of the natural
    world that can incorporate facts, laws, and tested hypotheses.” National Academy of Sciences, Science and Creationism: A view from the National Academy of Sciences, 2nd
    ed. (National Academy Press, 1999), 2.


    [92]
    Edward J. Larson & Larry Witham, “Scientists and
    Religion in America,” 281 Scientific American (September,
    1999):88-93.